Co-expression analysis

Gene ID Ptp.4724.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g20520: WAV2 (WAVY GROWTH 2) (HF=6e-53)
Module size 8 genes
NF 0.14
%ile 27.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8897.70.92Ptp.4724.1.S1_atCX182386hypothetical protein-6e-53At5g20520WAV2 (WAVY GROWTH 2)O.I.H.G.S.X.
0.2441.80.96PtpAffx.18233.1.S1_a_atBU833548hypothetical protein-5e-3At2g23310ATRER1C1O.I.H.G.S.X.
0.1932.70.95Ptp.3001.2.A1_s_atBP937097hypothetical protein-1e-3At2g44520COX10 (cytochrome c oxidase 10)O.I.H.G.S.X.
0.1626.90.94PtpAffx.85915.1.S1_atCK319340hypothetical protein-8e-8At1g06470phosphate translocator-relatedO.I.H.G.S.X.
0.1321.60.95PtpAffx.4058.1.S1_atCX657944hypothetical protein-1e-3At5g11980conserved oligomeric Golgi complex component-related / COG complex component-relatedO.I.H.G.S.X.
0.0711.60.95PtpAffx.62134.1.S1_atCX657226hypothetical protein-3e-1At5g14250COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)O.I.H.G.S.X.
0.0711.60.94PtpAffx.141306.1.S1_atBI068367hypothetical protein-3e-17At1g18340basal transcription factor complex subunit-relatedO.I.H.G.S.X.
0.058.30.95PtpAffx.132816.1.S1_atAJ893512.1hypothetical protein-3e-13At2g05320beta-1,2-N-acetylglucosaminyltransferase IIO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.798.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.697.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM362883Clone1979_LPI2_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.886.4GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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