Co-expression analysis

Gene ID	Ptp.4653.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g04880: adenosine/AMP deaminase family protein (HF=2e-21)
Module size	6 genes
NF	0.49
%ile	78.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.95	Ptp.4653.1.S1_at	CK116855	-	-	2e-21	At4g04880	adenosine/AMP deaminase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.95	PtpAffx.16547.1.A1_a_at	CV257887	hypothetical protein	-	4e-100	At2g43750	OASB (O-ACETYLSERINE (THIOL) LYASE B)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.96	PtpAffx.135096.1.S1_at	CV263444	hypothetical protein	-	5e-32	At4g02790	GTP-binding family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.95	PtpAffx.68644.1.S1_at	CX180837	hypothetical protein	-	4e-10	At4g17300	NS1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.96	PtpAffx.135096.2.S1_a_at	BI122655	hypothetical protein	-	8e-17	At4g02790	GTP-binding family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.95	PtpAffx.121212.1.A1_at	CV249010	-	-	3e-5	At1g30570	protein kinase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	96.9	GSM327408	Populus balsamifera_1006_root_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.8	94.9	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM334225	Populus balsamifera_1006_mature_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM372097	Clone3200_LPI5_N-_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM328566	Populus x canescens root hypoxia_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.9	87.2	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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