Co-expression analysis

Gene ID	Ptp.4034.2.S1_x_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At2g28790: osmotin-like protein, putative (HF=9e-15)
Module size	6 genes
NF	0.22
%ile	40.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	71.9	0.91	Ptp.4034.2.S1_x_at	CV243854	hypothetical protein	-	9e-15	At2g28790	osmotin-like protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.23	40.5	0.93	PtpAffx.12708.1.A1_at	CV256109	hypothetical protein	-	8e-44	At2g47260	WRKY23	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.22	38.3	0.93	PtpAffx.202002.1.S1_at	pmrna3994	hypothetical protein	-	5e-27	At5g57620	MYB36 (myb domain protein 36)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.20	34.6	0.92	Ptp.4034.2.S1_s_at	CV243854	hypothetical protein	-	9e-15	At2g28790	osmotin-like protein, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.17	29.1	0.93	PtpAffx.43846.1.A1_at	CV256274	hypothetical protein	-	2e+0	At3g06000	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.14	23.5	0.92	Ptp.7167.1.S1_s_at	DN497975	hypothetical protein	-	2e-4	At3g49220	pectinesterase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	98.5	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
5.2	96.8	GSM328483	Populus x canescens root control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.8	96.4	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.8	94.9	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.8	94.9	GSM328565	Populus x canescens root hypoxia_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.6	91.3	GSM328567	Populus x canescens root hypoxia_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM328562	Populus x canescens root hypoxia_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.5	90.9	GSM328564	Populus x canescens root hypoxia_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM362887	Clone1979_LPI5_N+_4w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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