Co-expression analysis

Gene ID	Ptp.3882.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g47120: ATBI1 (BAX INHIBITOR 1) (HF=2e-19)
Module size	9 genes
NF	0.64
%ile	93.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	84.2	0.96	Ptp.3882.1.S1_at	CV264407	hypothetical protein	-	2e-19	At5g47120	ATBI1 (BAX INHIBITOR 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.88	97.7	0.96	Ptp.1463.3.A1_s_at	CV263405	hypothetical protein	-	1e-4	At4g19200	proline-rich family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.78	95.1	0.97	PtpAffx.13438.1.S1_s_at	AI167052	hypothetical protein	-	2e-96	At3g28715	H+-transporting two-sector ATPase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	0.96	PtpAffx.13792.1.S1_at	CV267483	hypothetical protein	-	4e-20	At3g49390	CID10	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.96	PtpAffx.23209.1.S1_at	BP933116	hypothetical protein	-	2e-35	At4g22330	ATCES1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	0.96	Ptp.6966.1.S1_s_at	CV239698	-	-	4e-14	At5g14030	translocon-associated protein beta (TRAPB) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.97	PtpAffx.43623.2.A1_a_at	CV227115	hypothetical protein	-	7e-5	At3g03610	phagocytosis and cell motility protein ELMO1-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.97	Ptp.1758.1.A1_at	CV229748	hypothetical protein	-	5e-50	At1g60780	HAP13 (HAPLESS 13)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.32	55.2	0.96	PtpAffx.11912.1.S1_at	CV247192	hypothetical protein	-	2e-34	At3g07680	emp24/gp25L/p24 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.7	96.3	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.8	92.1	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM372093	Clone3200_LPI5_N+_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.7	85.5	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.6	84.5	GSM244430	non infected tissue, biological rep1	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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