Co-expression analysis

Gene ID Ptp.3474.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g61130: SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32) (HF=2e-15)
Module size 26 genes
NF 0.45
%ile 74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8397.00.90Ptp.3474.1.S1_atDN492800hypothetical protein-2e-15At1g61130SCPL32 (SERINE CARBOXYPEPTIDASE-LIKE 32)O.I.H.G.S.X.
0.6991.50.95Ptp.164.1.S1_atCV251881hypothetical protein-3e-2At1g14440AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31)O.I.H.G.S.X.
0.6388.10.95PtpAffx.224454.1.S1_atpmrna43008hypothetical protein-2e-7At1g08440-O.I.H.G.S.X.
0.6287.20.96PtpAffx.205555.1.S1_atpmrna10986hypothetical protein-2e-11At5g20240PI (PISTILLATA)O.I.H.G.S.X.
0.6187.00.95PtpAffx.163046.1.S1_atBU876539beta-ketoacyl-coa synthase family protein-1e-7At1g71160KCS7 (3-KETOACYL-COA SYNTHASE 7)O.I.H.G.S.X.
0.5582.20.94PtpAffx.215530.1.S1_atpmrna29783hypothetical protein-5e-9At5g46090unknown proteinO.I.H.G.S.X.
0.5582.20.94PtpAffx.207156.1.S1_atpmrna14196cytochrome P450-1e-5At2g23180CYP96A1O.I.H.G.S.X.
0.5380.50.93PtpAffx.43906.1.A1_atCV253972hypothetical protein-4e-7At2g28200nucleic acid binding / transcription factor/ zinc ion bindingO.I.H.G.S.X.
0.5279.40.93PtpAffx.208522.1.S1_atpmrna16907hypothetical protein-2e-14At3g06210bindingO.I.H.G.S.X.
0.5279.40.94PtpAffx.208303.1.S1_atpmrna16516hypothetical protein-1e-1At1g55330AGP21O.I.H.G.S.X.
0.5178.90.95PtpAffx.208357.1.S1_atpmrna16615hypothetical protein-1e-19At3g06210bindingO.I.H.G.S.X.
0.4975.70.94PtpAffx.210237.1.S1_atpmrna20155NAC domain protein, IPR003441-1e-41At5g07680ANAC080 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 80)O.I.H.G.S.X.
0.4875.40.95PtpAffx.209486.1.S1_s_atpmrna18810hypothetical protein-2e-14At5g04970pectinesterase, putativeO.I.H.G.S.X.
0.4774.60.96PtpAffx.205555.1.S1_s_atpmrna10986MIKC mads-box transcription factor /// hypothetical protein-2e-11At5g20240PI (PISTILLATA)O.I.H.G.S.X.
0.4673.70.94Ptp.3512.1.S1_s_atBU894954hypothetical protein-3e+0At4g02840small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putativeO.I.H.G.S.X.
0.4673.70.95PtpAffx.208357.1.S1_x_atpmrna16615hypothetical protein-1e-19At3g06210bindingO.I.H.G.S.X.
0.4471.90.93PtpAffx.209486.1.S1_atpmrna18810hypothetical protein-2e-14At5g04970pectinesterase, putativeO.I.H.G.S.X.
0.4268.60.95PtpAffx.63751.1.A1_atCV256283hypothetical protein-4e-8At1g22760PAB3 (POLY(A) BINDING PROTEIN 3)O.I.H.G.S.X.
0.4067.00.93PtpAffx.30954.1.S1_atCV254930hypothetical protein-1e-1At5g62860F-box family protein-relatedO.I.H.G.S.X.
0.3964.60.95PtpAffx.207395.1.S1_atpmrna14671hypothetical protein-3e-63At3g51070dehydration-responsive protein-relatedO.I.H.G.S.X.
0.3559.70.96PtpAffx.224567.1.S1_atpmrna43218hypothetical protein-5e-42At1g50310STP9 (SUGAR TRANSPORTER 9)O.I.H.G.S.X.
0.3255.20.95PtpAffx.211490.1.S1_atpmrna22518hypothetical protein-3e-32At2g03710SEP4 (SEPALLATA 4)O.I.H.G.S.X.
0.3153.70.96PtpAffx.217356.1.S1_atpmrna32578hypothetical protein-8e-1At3g48330PIMT1 (PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 1)O.I.H.G.S.X.
0.3153.70.96PtpAffx.215800.1.S1_atpmrna30196hypothetical protein-2e-12At3g19090RNA-binding protein, putativeO.I.H.G.S.X.
0.2441.80.95PtpAffx.203722.1.S1_atpmrna7360hypothetical protein-8e-1At5g55508unknown proteinO.I.H.G.S.X.
0.2034.60.93PtpAffx.201589.1.S1_atpmrna3127hypothetical protein-6e-1At1g28190unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.397.7GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.797.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.696.2GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.583.5GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.482.3GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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