Co-expression analysis

Gene ID Ptp.325.1.A1_s_at
Gene name cytochrome P450
Homology with ArabidopsisSimilar to At1g01190: CYP78A8 (HF=7e-3)
Module size 6 genes
NF 0.55
%ile 85.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3964.60.93Ptp.325.1.A1_s_atCK088352cytochrome P450-7e-3At1g01190CYP78A8O.I.H.G.S.X.
0.8096.00.95PtpAffx.203780.1.S1_atpmrna7465hypothetical protein-1e-4At3g09020alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing proteinO.I.H.G.S.X.
0.6791.10.95PtpAffx.224333.1.S1_x_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)O.I.H.G.S.X.
0.6791.10.95PtpAffx.224333.1.S1_atpmrna42787hypothetical protein-1e-1At1g74090SOT18 (DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18)O.I.H.G.S.X.
0.4471.90.95PtpAffx.158656.2.S1_atCX654035hypothetical protein-1e-4At3g08030unknown proteinO.I.H.G.S.X.
0.3357.50.95Ptp.7632.1.S1_atDN497977ZIP transporter-2e-1At5g59520ZIP2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.796.3GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.095.3GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.995.1GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.894.9GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.794.7GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.293.5GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.25821.1.S1_at, orthologous to the query gene, Ptp.325.1.A1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9094.8TaAffx.25821.1.S1_atAt1g01190--1e+1At4g18280glycine-rich cell wall protein-relatedO.I.H.G.S.X.
0.7589.8TaAffx.56920.1.S1_s_atAt1g01190--3e+0At3g53570AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1)O.I.H.G.S.X.
0.6081.0Ta.5514.3.S1_s_atAt1g01190--2e-2At5g66390peroxidase 72 (PER72) (P72) (PRXR8)O.I.H.G.S.X.
0.5678.6Ta.19450.1.S1_atAt1g01190--6e-1At5g36320-O.I.H.G.S.X.
0.5678.6Ta.21115.2.S1_x_atAt1g01190--2e-7At5g40150peroxidase, putativeO.I.H.G.S.X.
0.5072.4Ta.19484.1.S1_atAt1g01190--1e+1At2g03931-O.I.H.G.S.X.
0.4869.0Ta.5345.1.S1_x_atAt1g01190--8e+0At5g25102unknown proteinO.I.H.G.S.X.
0.4565.2Ta.1708.1.A1_atAt1g01190--3e-1At5g50430UBC33 (ubiquitin-conjugating enzyme 33)O.I.H.G.S.X.
0.4362.2TaAffx.93308.1.S1_atAt1g01190--2e+0At4g30270MERI5B (meristem-5)O.I.H.G.S.X.
0.4058.4Ta.28353.2.S1_atAt1g01190Nar2.2 protein-5e-1At2g22230beta-hydroxyacyl-ACP dehydratase, putativeO.I.H.G.S.X.
0.3956.1TaAffx.56637.1.S1_atAt1g01190--6e+0At3g50260CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)O.I.H.G.S.X.
0.3956.1Ta.13937.1.A1_atAt1g01190--5e+0At1g26480GRF12 (GENERAL REGULATORY FACTOR 12)O.I.H.G.S.X.
0.3854.7TaAffx.64631.1.A1_atAt1g01190--5e+0At5g24655LSU4 (RESPONSE TO LOW SULFUR 4)O.I.H.G.S.X.
0.3651.9TaAffx.119224.1.A1_atAt1g01190--1e+0At4g11290peroxidase, putativeO.I.H.G.S.X.
0.3651.9Ta.21109.1.A1_atAt1g01190--4e+0At3g51260PAD1 (20s proteasome alpha subunit pad1)O.I.H.G.S.X.
0.3651.9TaAffx.119224.1.A1_x_atAt1g01190--1e+0At4g11290peroxidase, putativeO.I.H.G.S.X.
0.3448.1TaAffx.106176.1.S1_x_atAt1g01190--3e-1At5g17820peroxidase 57 (PER57) (P57) (PRXR10)O.I.H.G.S.X.
0.3448.1TaAffx.134950.1.S1_atAt1g01190--4e+0At5g59950RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.3346.9TaAffx.70285.1.S1_atAt1g01190--2e+0At4g37730AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7)O.I.H.G.S.X.
0.2839.2Ta.18673.1.S1_atAt1g01190--4e+0At4g34150C2 domain-containing proteinO.I.H.G.S.X.
0.2839.2Ta.16452.1.S1_atAt1g01190--3e+0At5g20790unknown proteinO.I.H.G.S.X.
0.2633.6Ta.18810.1.S1_atAt1g01190--7e-1At3g27416unknown proteinO.I.H.G.S.X.
0.2430.3TaAffx.9193.1.S1_atAt1g01190--6e-2At1g60710ATB2O.I.H.G.S.X.
0.2329.0Ta.19141.1.S1_atAt1g01190--1e-1At5g24120SIGE (SIGMA FACTOR E)O.I.H.G.S.X.
0.2227.1TaAffx.56776.1.S1_atAt1g01190--2e+1At5g10745unknown proteinO.I.H.G.S.X.
0.2125.5TaAffx.9045.1.S1_atAt1g01190--1e-2At1g06500unknown proteinO.I.H.G.S.X.
0.1719.8Ta.16702.1.S1_atAt1g01190--8e+0At4g24130unknown proteinO.I.H.G.S.X.
0.1719.8Ta.5334.1.A1_atAt1g01190--4e+0At1g64065-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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