Co-expression analysis

Gene ID	Ptp.3099.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g26970: protein kinase, putative (HF=5e-1)
Module size	7 genes
NF	0.66
%ile	94.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	82.2	0.94	Ptp.3099.1.S1_at	CK092480	hypothetical protein	-	5e-1	At1g26970	protein kinase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.83	97.0	0.96	PtpAffx.37311.1.A1_at	CV256718	hypothetical protein	-	3e-11	At5g44380	FAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.95	Ptp.3890.1.S1_at	DN489074	-	-	1e-7	At4g24340	phosphorylase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	0.95	PtpAffx.209991.1.S1_at	pmrna19711	hypothetical protein	-	8e-6	At1g54890	late embryogenesis abundant protein-related / LEA protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.95	Ptp.6999.1.S1_at	CV272247	-	-	7e+0	At4g30662	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.96	PtpAffx.1257.3.A1_at	CA934446	hypothetical protein	-	4e-4	At1g62500	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.97	PtpAffx.146472.1.A1_at	CV275539	hypothetical protein	-	1e+0	At2g03110	RNA binding / nucleic acid binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.4	98.2	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
6.4	97.7	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
5.6	97.2	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.7	85.5	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
1.6	84.5	GSM327402	Populus balsamifera_20071015_Etiolated_seedling_6d_2	GSE13990	Populus balsamifera developmental tissue series
1.5	83.5	GSM328284	Populus x canescens root control_rep_03	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.3	81.0	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.3	81.0	GSM327406	Populus balsamifera_1006_young_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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