Co-expression analysis

Gene ID Ptp.275.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g29390: COR314-TM2 (HF=1e-4)
Module size 7 genes
NF 0.04
%ile 8.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8096.00.85Ptp.275.1.S1_atCK097963--1e-4At1g29390COR314-TM2O.I.H.G.S.X.
0.1321.60.92PtpAffx.43233.1.A1_atCV283197hypothetical protein-2e-40At2g45870unknown proteinO.I.H.G.S.X.
0.1219.60.89PtpAffx.26517.1.S1_atCK094602hypothetical protein-4e+0At3g53450unknown proteinO.I.H.G.S.X.
0.0711.60.91PtpAffx.203198.1.S1_atpmrna6338hypothetical protein-6e-8At1g62960ACS10 (ACC SYNTHASE 10)O.I.H.G.S.X.
0.035.20.84PtpAffx.172.2.S1_atCK094032--3e-5At5g14040mitochondrial phosphate transporterO.I.H.G.S.X.
0.035.20.87PtpAffx.63358.2.S1_a_atDN486399hypothetical protein-2e+0At5g46980invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.012.20.86PtpAffx.23528.1.S1_atCV228036hypothetical protein-6e-106At5g05200ABC1 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.1GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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