Co-expression analysis

Gene ID	Ptp.273.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At3g42050: vacuolar ATP synthase subunit H family protein (HF=2e-24)
Module size	6 genes
NF	0.27
%ile	49.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	88.1	0.95	Ptp.273.1.S1_at	CK087938	hypothetical protein	-	2e-24	At3g42050	vacuolar ATP synthase subunit H family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.96	PtpAffx.65111.1.A1_at	CK094652	-	-	1e+0	At5g60480	AtHB26 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 26)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.42	68.6	0.96	PtpAffx.69398.1.A1_at	CV258513	hypothetical protein	-	8e-1	At5g58280	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.96	PtpAffx.2700.1.A1_at	CV251058	hypothetical protein	-	1e-6	At5g57860	ubiquitin family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.16	26.9	0.96	PtpAffx.31540.1.S1_s_at	CV257988	hypothetical protein	-	1e-14	At5g18230	transcription regulator NOT2/NOT3/NOT5 family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.13	21.6	0.95	PtpAffx.39208.1.S1_at	BP935754	hypothetical protein	-	6e-58	At4g24550	clathrin adaptor complexes medium subunit family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	97.9	GSM334225	Populus balsamifera_1006_mature_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.8	96.4	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
3.4	94.0	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
3.2	93.5	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM244435	Mlp infected tissue, biological rep3	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.5	90.9	GSM244439	Mixed infected tissue, biological rep1	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.1	88.6	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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