Co-expression analysis

Gene ID Ptp.2670.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g33140: unknown protein (HF=7e-12)
Module size 6 genes
NF 0.34
%ile 59.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5984.90.92Ptp.2670.1.S1_atCK092079hypothetical protein-7e-12At4g33140unknown proteinO.I.H.G.S.X.
0.6086.00.92Ptp.6210.1.S1_s_atCV267239--1e-11At2g38740haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.5078.60.92Ptp.2252.1.A1_atCV256583--1e-39At1g78570RHM1 (RHAMNOSE BIOSYNTHESIS 1)O.I.H.G.S.X.
0.4067.00.93PtpAffx.878.4.S1_atBU813426hypothetical protein-4e-18At1g21660heat shock protein bindingO.I.H.G.S.X.
0.2340.50.93PtpAffx.35198.1.S1_atDN500881hypothetical protein-4e+0At5g03400unknown proteinO.I.H.G.S.X.
0.1219.60.92PtpAffx.26991.1.S1_atDN487309hypothetical protein-3e-6At4g12000-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.698.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.193.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
3.092.9GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM372093Clone3200_LPI5_N+_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.289.3GSM372091Clone3200_LPI2_N-_4w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.088.0GSM362887Clone1979_LPI5_N+_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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