Co-expression analysis

Gene ID	Ptp.2633.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g11840: ATGLX1 (GLYOXALASE I HOMOLOG) (HF=2e-75)
Module size	6 genes
NF	0.44
%ile	73.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	97.0	0.93	Ptp.2633.1.S1_at	CK095904	hypothetical protein	-	2e-75	At1g11840	ATGLX1 (GLYOXALASE I HOMOLOG)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.95	PtpAffx.28909.1.S1_at	CV280924	hypothetical protein	-	5e-2	At5g53390	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	0.94	PtpAffx.126034.1.S1_at	BP922562	-	-	6e-27	At2g23150	NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.29	50.5	0.93	PtpAffx.111671.1.S1_at	CV271992	-	-	1e-5	At2g26510	PDE135 (pigment defective embryo 135)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.94	PtpAffx.1601.19.S1_at	CV276738	hypothetical protein	-	5e-4	At4g19390	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.25	43.6	0.93	PtpAffx.19675.2.S1_s_at	CA823947	hypothetical protein	-	4e-1	At1g43630	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	96.1	GSM328564	Populus x canescens root hypoxia_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
4.0	95.3	GSM328562	Populus x canescens root hypoxia_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.9	95.1	GSM328567	Populus x canescens root hypoxia_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.8	94.9	GSM328565	Populus x canescens root hypoxia_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
3.1	93.2	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.8	92.1	GSM328274	Populus x canescens leaf hypoxia_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.8	92.1	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM328532	Populus x canescens root hypoxia_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.3	89.8	GSM328560	Populus x canescens root control_rep_11	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.2	89.3	GSM328070	Populus x canescens leaf control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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