Co-expression analysis

Gene ID	Ptp.2592.2.S1_x_at
Gene name	thioredoxin h
Homology with Arabidopsis	Similar to At1g45145: ATTRX5 (HF=8e-6)
Module size	7 genes
NF	0.48
%ile	78.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	78.6	0.92	Ptp.2592.2.S1_x_at	CX185841	thioredoxin h	-	8e-6	At1g45145	ATTRX5	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.92	PtpAffx.5082.1.A1_at	CV262317	-	-	2e-1	At1g05205	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.93	PtpAffx.2792.1.S1_at	CN524220	ATP/ADP transporter	-	2e-24	At1g15500	ATNTT2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.50	78.6	0.93	PtpAffx.33582.1.A1_a_at	BP934623	hypothetical protein	-	2e-16	At4g13010	oxidoreductase, zinc-binding dehydrogenase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.92	PtpAffx.20736.1.S1_at	BP932567	-	-	0	Atcg00020	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.39	64.6	0.92	PtpAffx.209435.1.S1_at	pmrna18682	hypothetical protein	-	3e-66	At5g04360	ATLDA (LIMIT DEXTRINASE)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.93	PtpAffx.5179.2.A1_at	CV254168	hypothetical protein	-	1e-10	At3g58670	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.2	89.3	GSM244438	Mmd infected tissue, biological rep3	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
2.2	89.3	GSM327405	Populus balsamifera_1006_young_leaf_midday_2	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM244441	Mixed infected tissue, biological rep3	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.9	87.2	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM372044	Clone1979_LPI5_N+_8w_rep1	GSE14515	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
1.8	86.4	GSM372090	Clone3200_LPI2_N+_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
1.8	86.4	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM328059	Populus x canescens leaf control_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.8	86.4	GSM244439	Mixed infected tissue, biological rep1	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.7	85.5	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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