Co-expression analysis

Gene ID	Ptp.2453.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At5g52240: MSBP1 (membrane steroid binding protein 1) (HF=2e-28)
Module size	6 genes
NF	0.64
%ile	93.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	78.6	0.97	Ptp.2453.1.S1_at	CV284013	hypothetical protein	-	2e-28	At5g52240	MSBP1 (membrane steroid binding protein 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.73	93.6	0.98	PtpAffx.4784.1.A1_s_at	CV268464	hypothetical protein	-	8e+0	At5g27290	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	0.97	Ptp.7476.1.A1_s_at	CK111860	hypothetical protein	-	4e-42	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.98	Ptp.4943.1.S1_at	CV249629	hypothetical protein	-	2e-99	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.57	84.2	0.98	PtpAffx.6505.1.A1_s_at	CV238517	hypothetical protein	-	2e-36	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.47	74.6	0.97	Ptp.5592.1.S1_at	AF272572.1	hypothetical protein	-	5e-82	At5g38480	GRF3 (GENERAL REGULATORY FACTOR 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.3	89.8	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
1.8	86.4	GSM328281	Populus x canescens root control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328292	Populus x canescens root control_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328563	Populus x canescens root hypoxia_rep_05	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328559	Populus x canescens root control_rep_10	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328558	Populus x canescens root control_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328561	Populus x canescens root control_rep_12	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328483	Populus x canescens root control_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.6	84.5	GSM328557	Populus x canescens root control_rep_08	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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