Co-expression analysis

Gene ID Ptp.2373.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g52310: protein kinase family protein / C-type lectin domain-containing protein (HF=2e-28)
Module size 6 genes
NF 0.54
%ile 84.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5683.90.95Ptp.2373.1.A1_atCK092286--2e-28At1g52310protein kinase family protein / C-type lectin domain-containing proteinO.I.H.G.S.X.
0.6791.10.94PtpAffx.44748.1.S1_s_atDN495834hypothetical protein-3e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.6791.10.95Ptp.7415.1.S1_atCV268556hypothetical protein-1e-13At5g63610CDKEO.I.H.G.S.X.
0.5380.50.94PtpAffx.73438.1.S1_atCV243919hypothetical protein-1e-24At5g62070IQD23 (IQ-domain 23)O.I.H.G.S.X.
0.4067.00.94PtpAffx.44668.1.S1_atCV228752hypothetical protein-1e+0At3g30370-O.I.H.G.S.X.
0.3863.70.94PtpAffx.98869.1.S1_atBU819156hypothetical protein-1e-2At2g27570sulfotransferase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.896.4GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327400Populus balsamifera_20071015_Etiolated_seedling_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327402Populus balsamifera_20071015_Etiolated_seedling_6d_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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