Co-expression analysis

Gene ID	Ptp.2373.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g52310: protein kinase family protein / C-type lectin domain-containing protein (HF=2e-28)
Module size	6 genes
NF	0.54
%ile	84.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.56	83.9	0.95	Ptp.2373.1.A1_at	CK092286	-	-	2e-28	At1g52310	protein kinase family protein / C-type lectin domain-containing protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.94	PtpAffx.44748.1.S1_s_at	DN495834	hypothetical protein	-	3e+0	At1g27970	NTF2B (NUCLEAR TRANSPORT FACTOR 2B)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.95	Ptp.7415.1.S1_at	CV268556	hypothetical protein	-	1e-13	At5g63610	CDKE	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.53	80.5	0.94	PtpAffx.73438.1.S1_at	CV243919	hypothetical protein	-	1e-24	At5g62070	IQD23 (IQ-domain 23)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	0.94	PtpAffx.44668.1.S1_at	CV228752	hypothetical protein	-	1e+0	At3g30370	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.38	63.7	0.94	PtpAffx.98869.1.S1_at	BU819156	hypothetical protein	-	1e-2	At2g27570	sulfotransferase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	96.4	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.7	94.7	GSM327400	Populus balsamifera_20071015_Etiolated_seedling_6d_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327402	Populus balsamifera_20071015_Etiolated_seedling_6d_2	GSE13990	Populus balsamifera developmental tissue series
2.6	91.3	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.6	91.3	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM334224	Populus balsamifera_1006_mature_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM328062	Populus x canescens leaf control_rep_02	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.4	90.4	GSM328564	Populus x canescens root hypoxia_rep_06	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328567	Populus x canescens root hypoxia_rep_09	GSE13109	Effect of hypoxia on gene expression in Grey poplar
2.1	88.6	GSM328066	Populus x canescens leaf control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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