Co-expression analysis

Gene ID Ptp.1913.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g02450: glycine-rich protein (HF=5e-1)
Module size 6 genes
NF 0.46
%ile 75.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7794.90.96Ptp.1913.1.A1_atCV263831hypothetical protein-5e-1At4g02450glycine-rich proteinO.I.H.G.S.X.
0.5078.60.96PtpAffx.202881.1.S1_s_atpmrna5689hypothetical protein-1e-21At1g72470ATEXO70D1 (exocyst subunit EXO70 family protein D1)O.I.H.G.S.X.
0.4673.70.96Ptp.1382.1.A1_atCV258748acyl:coa ligase-5e-19At1g20510OPCL1 (OPC-8:0 COA LIGASE1)O.I.H.G.S.X.
0.4471.90.96Ptp.3030.1.S1_s_atDN484799hypothetical protein-6e-15At1g79440ALDH5F1O.I.H.G.S.X.
0.3052.00.96PtpAffx.27171.1.A1_atCV229989hypothetical protein-5e-5At2g31510IBR domain-containing protein / ARIADNE-like protein ARI7 (ARI7)O.I.H.G.S.X.
0.2340.50.97PtpAffx.42410.1.S1_s_atBP922740hypothetical protein-1e-20At1g64140-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.393.7GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os03g0374400, orthologous to the query gene, Ptp.1913.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9399.2Os03g0374400At4g02450-Conserved hypothetical protein1e-6At2g02370-O.I.H.G.S.X.
0.3846.9Os06g0267500At4g02450-NAM1 protein (Fragment)3e-4At1g28470ANAC010 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 10)O.I.H.G.S.X.
0.3541.7Os05g0393100At4g02450-Leucine-rich repeat, plant specific containingprotein1e+0At4g23580kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3032.7Os02g0769800At4g02450-MAP3K beta 3 protein kinase (EC 2.7.1.37)(Fragment)2e+0At4g34790auxin-responsive family proteinO.I.H.G.S.X.
0.2831.1Os11g0585900At4g02450-ETO1-like protein 1 (Ethylene overproducer 1-likeprotein 1)5e-22At4g02680EOL1 (ETO1-LIKE 1)O.I.H.G.S.X.
0.2831.1Os03g0703400At4g02450-MAP3K beta 3 protein kinase (EC 2.7.1.37)(Fragment)8e-2At1g63700YDA (YODA)O.I.H.G.S.X.
0.2524.1Os02g0682500At4g02450-TRANSPARENT TESTA GLABRA 1 protein (TTG1 protein)2e-1At5g52060ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1)O.I.H.G.S.X.
0.2321.2Os06g0708300At4g02450-RER1B protein (AtRER1B)3e-1At4g39220ATRER1AO.I.H.G.S.X.
0.2016.5Os07g0177300At4g02450-Protein of unknown function UPF0005 family protein6e-4At4g15470-O.I.H.G.S.X.
0.1611.3Os08g0538300At4g02450-LysM domain-containing receptor-like kinase 33e-13At3g21630CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1)O.I.H.G.S.X.
0.1611.3Os11g0472500At4g02450-Protein of unknown function UPF0016 family protein5e-17At5g36290unknown proteinO.I.H.G.S.X.
0.1611.3Os03g0239200At4g02450-Arabidopsis thaliana 130.7kDa hypothetical proteinfamily protein1e-10At1g14740unknown proteinO.I.H.G.S.X.
0.149.3Os03g0764300At4g02450-Protein kinase domain containing protein2e-9At5g66850MAPKKK5O.I.H.G.S.X.
0.073.7Os08g0544800At4g02450-PCF23e-3At2g05510glycine-rich proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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