Co-expression analysis

Gene ID	Ptp.1602.1.S1_at
Gene name	hypothetical protein
Homology with Arabidopsis	Similar to At1g20930: CDKB2 (HF=8e-102)
Module size	6 genes
NF	0.78
%ile	98.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	94.9	0.95	Ptp.1602.1.S1_at	AY307372.1	hypothetical protein	-	8e-102	At1g20930	CDKB2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.94	PtpAffx.206227.1.S1_at	pmrna12360	hypothetical protein	-	6e-68	At2g37420	kinesin motor protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	0.94	PtpAffx.212217.1.S1_at	pmrna23950	hypothetical protein	-	8e-47	At1g54385	binding	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.94	PtpAffx.44525.1.A1_at	CV228923	hypothetical protein	-	1e+0	At2g41530	SFGH (S-FORMYLGLUTATHIONE HYDROLASE)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.93	PtpAffx.206215.1.S1_at	pmrna12339	hypothetical protein	-	6e-19	At2g45490	AtAUR3 (ATAURORA3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.94	PtpAffx.204430.1.S1_at	pmrna8705	hypothetical protein	-	2e-160	At3g44050	kinesin motor protein-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	96.8	GSM327660	Populus balsamifera_Male_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.1	95.5	GSM327404	Populus balsamifera_1006_young_leaf_midday_1	GSE13990	Populus balsamifera developmental tissue series
3.3	93.7	GSM327659	Populus balsamifera_Male_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.9	92.5	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.3	89.8	GSM372097	Clone3200_LPI5_N-_8w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.2	89.3	GSM372096	Clone3200_LPI5_N-_4w_rep2	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM372095	Clone3200_LPI5_N-_4w_rep1	GSE14893	Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
2.1	88.6	GSM327656	Populus balsamifera_Female_Catkin_midday_1	GSE13990	Populus balsamifera developmental tissue series
2.1	88.6	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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