Co-expression analysis

Gene ID Ptp.1042.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g16170: unknown protein (HF=4e-1)
Module size 6 genes
NF 0.41
%ile 69.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.96Ptp.1042.1.A1_atCV266554hypothetical protein-4e-1At1g16170unknown proteinO.I.H.G.S.X.
0.6187.00.95PtpAffx.103891.1.A1_atCV254829f-box family protein /// hypothetical protein-5e-4At3g61590HWS (HAWAIIAN SKIRT)O.I.H.G.S.X.
0.4268.60.95PtpAffx.450.5.A1_atCV278124hypothetical protein-2e-56At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.3863.70.96PtpAffx.202487.1.S1_atpmrna4986hypothetical protein-8e-32At3g21610-O.I.H.G.S.X.
0.2747.10.95Ptp.2415.1.A1_s_atCX175044hypothetical protein-6e-13At3g23300dehydration-responsive protein-relatedO.I.H.G.S.X.
0.1729.10.96PtpAffx.149457.2.S1_s_atCX181884hypothetical protein-1e-3At1g16170unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.395.8GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.590.9GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.389.8GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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