Co-expression analysis

Gene ID Ptp.1041.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g64680: unknown protein (HF=3e-45)
Module size 6 genes
NF 0.71
%ile 96.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.00.96Ptp.1041.1.S1_atCK090202hypothetical protein-3e-45At1g64680unknown proteinO.I.H.G.S.X.
0.9199.20.97PtpAffx.135079.1.S1_s_atDN496393hypothetical protein-1e-19At5g38660APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)O.I.H.G.S.X.
0.8096.00.97PtpAffx.204053.1.S1_x_atpmrna7991hypothetical protein-2e-30At5g38660APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)O.I.H.G.S.X.
0.6388.10.96PtpAffx.138160.1.S1_s_atAJ767883hypothetical protein-3e-29At1g64680unknown proteinO.I.H.G.S.X.
0.4471.90.97PtpAffx.86181.1.S1_atBI126733--4e-16At1g54520unknown proteinO.I.H.G.S.X.
0.4471.90.97PtpAffx.35031.1.S1_atBU810466hypothetical protein-9e-19At1g55480binding / protein bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.697.9GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.894.9GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM328059Populus x canescens leaf control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM328275Populus x canescens leaf hypoxia_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.892.1GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.791.8GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.691.3GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.590.9GSM328274Populus x canescens leaf hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM362888Clone1979_LPI5_N+_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.490.4GSM362890Clone1979_LPI5_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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