Co-expression analysis

Gene ID PsAffx.psZS010xK06f_s_at
Gene name
Homology with ArabidopsisSimilar to At1g19300: PARVUS (PARVUS) (HF=3e-1)
Module size 27 genes
NF 0.25
%ile 50.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.60.75PsAffx.psZS010xK06f_s_atPsAffx.psZS010xK06f--3e-1At1g19300PARVUS (PARVUS)O.I.H.G.S.X.
0.5172.30.87PsAffx.C17000057_atPsAffx.C17000057--5e+0At5g07330unknown proteinO.I.H.G.S.X.
0.4665.50.83PsAffx.C40000003_atPsAffx.C40000003--2e+0At5g41390-O.I.H.G.S.X.
0.4158.10.85PsAffx.psHA010iE04r_s_atPsAffx.psHA010iE04r--4e+0At3g42560unknown proteinO.I.H.G.S.X.
0.3954.50.89PsAffx.psZO002iD02r_atPsAffx.psZO002iD02r--4e+0At4g13500unknown proteinO.I.H.G.S.X.
0.3650.80.87PsAffx.psMA013xH08f_atPsAffx.psMA013xH08f--4e+0At5g54095unknown proteinO.I.H.G.S.X.
0.3040.40.88PsAffx.C8000052_atPsAffx.C8000052--4e-1At2g15280reticulon family protein (RTNLB10)O.I.H.G.S.X.
0.2939.00.87PsAffx.C96000007_s_atPsAffx.C96000007--3e+0At5g58580ATL63 (ARABIDOPSIS TÓO.I.H.G.S.X.
0.2735.70.90PsAffx.C2000206_atPsAffx.C2000206--1e+0At5g25530DNAJ heat shock protein, putativeO.I.H.G.S.X.
0.2329.90.90PsAffx.C134000032_atPsAffx.C134000032--3e-1At2g39880MYB25 (myb domain protein 25)O.I.H.G.S.X.
0.2126.60.91PsAffx.C85000056_atPsAffx.C85000056--6e-1At4g05270ubiquitin family proteinO.I.H.G.S.X.
0.2126.60.87PsAffx.C61000014_atPsAffx.C61000014--3e-10At5g09730BXL3 (beta-xylosidase 3)O.I.H.G.S.X.
0.2025.10.92PsAffx.psZG005xN22f_s_atPsAffx.psZG005xN22f--9e+0At5g14602unknown proteinO.I.H.G.S.X.
0.1923.70.91PsAffx.C86000041_atPsAffx.C86000041--2e-1At1g31330PSAF (photosystem I subunit F)O.I.H.G.S.X.
0.1923.70.90PsAffx.C111000030_atPsAffx.C111000030--2e-4At4g31900chromatin remodeling factor, putativeO.I.H.G.S.X.
0.1822.30.89PsAffx.C4000059_atPsAffx.C4000059--2e-1At2g32890RALFL17 (RALF-LIKE 17)O.I.H.G.S.X.
0.1822.30.90PsAffx.C190000010_atPsAffx.C190000010--3e+0At2g18010auxin-responsive family proteinO.I.H.G.S.X.
0.1721.20.89PsAffx.CL2431Contig1_atPsAffx.CL2431Contig1--7e-2At1g77200AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.1721.20.91PsAffx.psMA003xN10f_s_atPsAffx.psMA003xN10f--3e+0At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)O.I.H.G.S.X.
0.1721.20.92PsAffx.C105000039_atPsAffx.C105000039--1e-4At4g17950DNA-binding family proteinO.I.H.G.S.X.
0.1619.70.90PsAffx.C30000086_atPsAffx.C30000086--6e-1At2g42590GRF9 (GENERAL REGULATORY FACTOR 9)O.I.H.G.S.X.
0.1518.70.91HgAffx.4438.1.S1_atCD748986--1e+1At5g11760unknown proteinO.I.H.G.S.X.
0.1518.70.89PsAffx.CL1633Contig1_atPsAffx.CL1633Contig1--2e+1At3g5634040S ribosomal protein S26 (RPS26C)O.I.H.G.S.X.
0.1518.70.91PsAffx.C83000002_atPsAffx.C83000002--9e-1At3g28980unknown proteinO.I.H.G.S.X.
0.1215.10.91HgAffx.7400.1.A1_atCK348425--1e+0At2g05540glycine-rich proteinO.I.H.G.S.X.
0.1215.10.89PsAffx.C77000031_s_atPsAffx.C77000031--1e-2At1g70280NHL repeat-containing proteinO.I.H.G.S.X.
0.1114.20.92PsAffx.psMA013xP16f_atPsAffx.psMA013xP16f--3e-1At2g30560glycine-rich proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.599.6GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.698.9GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.498.9GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.398.6GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.298.6GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.298.6GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.397.5GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.097.2GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM24481318_VP9.I5U4.CEL, Experimental replicate 4GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
3.696.7GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
3.496.4GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.396.2GSM17169432_V.L.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.396.2GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.296.0GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.296.0GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.296.0GSM29319577_1130.1O.R082P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.095.6GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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