Co-expression analysis

Gene ID PsAffx.psHB005xN04f_at
Gene name
Homology with ArabidopsisSimilar to At3g04943: LCR41 (Low-molecular-weight cysteine-rich 41) (HF=1e+1)
Module size 29 genes
NF 0.95
%ile 99.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9093.70.97PsAffx.psHB005xN04f_atPsAffx.psHB005xN04f--1e+1At3g04943LCR41 (Low-molecular-weight cysteine-rich 41)O.I.H.G.S.X.
0.98100.00.98PsAffx.CL197Contig3_atPsAffx.CL197Contig3--5e+0At3g50270transferase family proteinO.I.H.G.S.X.
0.98100.00.98PsAffx.CL192Contig1_atPsAffx.CL192Contig1--5e-1At5g54660heat shock protein-relatedO.I.H.G.S.X.
0.9799.80.97PsAffx.CL153Contig1_atPsAffx.CL153Contig1--5e+0At5g65495unknown proteinO.I.H.G.S.X.
0.9799.80.98PsAffx.CL1179Contig1_atPsAffx.CL1179Contig1--3e+0At3g59810small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putativeO.I.H.G.S.X.
0.9799.80.98PsAffx.CL327Contig1_atPsAffx.CL327Contig1--5e-1At5g28630glycine-rich proteinO.I.H.G.S.X.
0.9699.60.97GmaAffx.53613.1.S1_s_atBE583909--3e+0At5g28660-O.I.H.G.S.X.
0.9699.60.98PsAffx.C49000056_atPsAffx.C49000056--7e+0At5g22650HD2B (HISTONE DEACETYLASE 2B)O.I.H.G.S.X.
0.9699.60.98PsAffx.CL84Contig2_atPsAffx.CL84Contig2--5e+0At4g30460glycine-rich proteinO.I.H.G.S.X.
0.9699.60.98PsAffx.CL392Contig1_atPsAffx.CL392Contig1--1e-1At1g52830IAA6 (INDOLE-3-ACETIC ACID 6)O.I.H.G.S.X.
0.9699.60.98PsAffx.CL274Contig1_atPsAffx.CL274Contig1--2e+0At2g06530VPS2.1O.I.H.G.S.X.
0.9599.40.98PsAffx.CL647Contig1_atPsAffx.CL647Contig1--4e-1At3g25600calcium ion bindingO.I.H.G.S.X.
0.9599.40.98PsAffx.C112000048_atPsAffx.C112000048--2e+0At1g49000unknown proteinO.I.H.G.S.X.
0.9599.40.98PsAffx.CL561Contig1_atPsAffx.CL561Contig1--5e+0At2g40230transferase family proteinO.I.H.G.S.X.
0.9599.40.98PsAffx.CL1036Contig1_atPsAffx.CL1036Contig1--4e+0At2g44270ATP bindingO.I.H.G.S.X.
0.9399.10.97PsAffx.C87000042_s_atPsAffx.C87000042--8e-1At4g35970APX5 (ASCORBATE PEROXIDASE 5)O.I.H.G.S.X.
0.9399.10.98PsAffx.C66000030_atPsAffx.C66000030--3e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.H.G.S.X.
0.9399.10.98PsAffx.psMC006xC02f_atPsAffx.psMC006xC02f--3e+0At5g16550unknown proteinO.I.H.G.S.X.
0.9399.10.98PsAffx.CL166Contig1_atPsAffx.CL166Contig1--2e+0At5g06270unknown proteinO.I.H.G.S.X.
0.9399.10.97PsAffx.CL170Contig1_s_atPsAffx.CL170Contig1--1e+1At5g57030LUT2 (LUTEIN DEFICIENT 2)O.I.H.G.S.X.
0.9399.10.98PsAffx.psMA002xD04f_atPsAffx.psMA002xD04f--3e-1At5g38070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.9298.90.97PsAffx.CL1578Contig1_atPsAffx.CL1578Contig1--2e+0At5g22710-O.I.H.G.S.X.
0.9298.90.97PsAffx.CL335Contig1_atPsAffx.CL335Contig1--4e+0At5g17220ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12)O.I.H.G.S.X.
0.9298.90.98PsAffx.CL441Contig1_atPsAffx.CL441Contig1--3e+1Atmg00540-O.I.H.G.S.X.
0.9093.70.97GmaAffx.39973.1.S1_s_atBE584110--1e+1At5g14500aldose 1-epimerase family proteinO.I.H.G.S.X.
0.9093.70.98PsAffx.C3000147_s_atPsAffx.C3000147--8e+0At3g53020STV1 (SHORT VALVE1)O.I.H.G.S.X.
0.8693.00.98PsAffx.psMA009xK08f_atPsAffx.psMA009xK08f--3e+0At4g13520SMAP1 (SMALL ACIDIC PROTEIN 1)O.I.H.G.S.X.
0.8592.80.97PsAffx.CL201Contig1_atPsAffx.CL201Contig1--6e+0At4g00355unknown proteinO.I.H.G.S.X.
0.8091.50.97PsAffx.CL76Contig1_atPsAffx.CL76Contig1--9e-1At5g65080MAF5 (MADS AFFECTING FLOWERING 5)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.699.6GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
14.999.6GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
12.999.5GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
12.799.5GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
12.699.5GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
12.299.5GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
11.599.4GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
11.399.4GSM17167728_Z.E.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
11.099.4GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
10.599.3GSM17164621_V.E.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
10.499.3GSM17166425_Y.E.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
10.199.3GSM17163419_V.F.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
9.499.2GSM17159910_W.I.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
9.499.2GSM1716852_Z.L.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.999.2GSM1717126_Y.L.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.499.1GSM1717198_W.L.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.899.0GSM1717106_V.L.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.998.8GSM17165623_Y.E.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.598.7GSM1716411_Z.I.M.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.498.6GSM17167628_Y.I.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.498.6GSM17167127_W.E.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.198.5GSM17168730_W.F.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.098.5GSM17163318_Y.F.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.798.4GSM17162717_W.L.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.698.3GSM17160411_Y.L.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.498.2GSM17163118_V.I.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.498.2GSM1717218_Z.E.M.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.198.1GSM17168129_Z.L.M.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.497.6GSM17161815_V.E.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.397.5GSM17169432_V.L.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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