Co-expression analysis

Gene ID	PsAffx.psHB004xH08f_at
Gene name
Homology with Arabidopsis	Similar to At3g61840: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.70
%ile	95.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	92.5	0.95	PsAffx.psHB004xH08f_at	PsAffx.psHB004xH08f	-	-	5e+0	At3g61840	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.95	GmaAffx.14280.1.S1_at	BM095066	-	-	1e-8	At1g22710	SUC2 (SUCROSE-PROTON SYMPORTER 2)	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.96	GmaAffx.14602.1.S1_at	BM731566	-	-	2e-1	At3g45851	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.96	HgAffx.19033.4.A1_x_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.96	HgAffx.19033.4.A1_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.96	HgAffx.17965.1.S1_at	CB278425	-	-	2e+0	At2g23340	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.4	99.1	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
5.2	98.1	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
4.9	98.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
3.9	97.1	GSM294427	82_2447.2J.R119L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM191087	Soybean_Cotyledon_II1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
3.6	96.7	GSM294426	81_3163.2J.SLJ1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294431	86_2456.2J.R220P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294423	79_2455.2J.R220L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM201107	Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.4	96.4	GSM201099	Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.3	96.2	GSM201100	Laser capture microdissected (LCM) axis parenchyma at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.3	96.2	GSM201118	Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
3.3	96.2	GSM294422	78_2467.2J.R216U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294436	90_2445.2J.R294U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM244814	19_SLO.M5W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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