Co-expression analysis

Gene ID PsAffx.psHB001xI19f_at
Gene name
Homology with ArabidopsisSimilar to At1g57990: ATPUP18 (HF=9e-1)
Module size 22 genes
NF 0.42
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.10.91PsAffx.psHB001xI19f_atPsAffx.psHB001xI19f--9e-1At1g57990ATPUP18O.I.H.G.S.X.
0.7087.10.95PsAffx.CL1583Contig1_atPsAffx.CL1583Contig1--1e+0At1g14455unknown proteinO.I.H.G.S.X.
0.6382.90.96PsAffx.CL1838Contig1_atPsAffx.CL1838Contig1--2e+0At3g59370unknown proteinO.I.H.G.S.X.
0.5778.80.95PsAffx.CL1220Contig1_s_atPsAffx.CL1220Contig1--2e+1At5g15310ATMYB16 (MYB DOMAIN PROTEIN 16)O.I.H.G.S.X.
0.5172.30.95PsAffx.CL846Contig1_atPsAffx.CL846Contig1--7e-2At5g57120-O.I.H.G.S.X.
0.4968.30.95PsAffx.psMC003xG06f_atPsAffx.psMC003xG06f--1e+1At2g37120DNA-binding S1FA family proteinO.I.H.G.S.X.
0.4463.30.96PsAffx.CL785Contig1_atPsAffx.CL785Contig1--1e+1At5g36920unknown proteinO.I.H.G.S.X.
0.4360.60.96PsAffx.CL1056Contig1_atPsAffx.CL1056Contig1--2e+1At5g06410DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4158.10.96PsAffx.CL792Contig1_atPsAffx.CL792Contig1--3e+0At3g29250copper ion binding / oxidoreductaseO.I.H.G.S.X.
0.4057.10.95PsAffx.CL235Contig1_atPsAffx.CL235Contig1--5e-1At5g24230-O.I.H.G.S.X.
0.3751.70.93PsAffx.CL2361Contig1_s_atPsAffx.CL2361Contig1--4e+0At3g5374060S ribosomal protein L36 (RPL36B)O.I.H.G.S.X.
0.3548.60.95PsAffx.CL629Contig1_atPsAffx.CL629Contig1--8e-2At3g25530GLYR1 (GLYOXYLATE REDUCTASE 1)O.I.H.G.S.X.
0.3346.10.94PsAffx.psMC011xF06f_atPsAffx.psMC011xF06f--2e-1At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.3346.10.96PsAffx.CL892Contig1_atPsAffx.CL892Contig1--5e+0At4g14805protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedO.I.H.G.S.X.
0.3243.70.95PsAffx.psMY010iB02r_atPsAffx.psMY010iB02r--3e+0At2g26670TED4 (REVERSAL OF THE DET PHENOTYPE 4)O.I.H.G.S.X.
0.3243.70.97PsAffx.CL1Contig43_s_atPsAffx.CL1Contig43--7e-1At1g65445transferase-relatedO.I.H.G.S.X.
0.3142.20.95Gma.4246.1.S1_s_atBI971940--2e+0At5g44550integral membrane family proteinO.I.H.G.S.X.
0.2939.00.96PsAffx.psHA009iD02r_s_atPsAffx.psHA009iD02r--3e+0At1g54095unknown proteinO.I.H.G.S.X.
0.2939.00.96PsAffx.CL1523Contig1_atPsAffx.CL1523Contig1--4e+0At4g03270CYCD6O.I.H.G.S.X.
0.2839.00.96PsAffx.CL404Contig1_atPsAffx.CL404Contig1--6e-3At2g47470UNE5 (UNFERTILIZED EMBRYO SAC 5)O.I.H.G.S.X.
0.2839.00.96PsAffx.CL2464Contig1_atPsAffx.CL2464Contig1--5e+0At1g57765unknown proteinO.I.H.G.S.X.
0.2329.90.97PsAffx.CL643Contig1_atPsAffx.CL643Contig1--5e-2At1g62333unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.399.5GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
10.799.4GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
10.099.3GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
9.199.2GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
8.199.0GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.999.0GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.298.9GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.298.9GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.198.8GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.798.7GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.798.7GSM29296644_C221.1M.R9M1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.698.7GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.398.6GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29307171_1055.1N.R032L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29415015_3131.2H.R9H1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29329477_C067.1P.R9P3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.998.5GSM29426220_2405.2I.R084L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.998.5GSM29324835_1155.1P.R097L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.898.4GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.898.4GSM2923602_C093.1F.R9F1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.698.3GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM29298662_C223.1M.R9M2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM29323624_1207.1P.R128L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM29218242_1001.1A.R001L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.198.1GSM2449205_VP9.I5L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.597.7GSM24489036_SLO.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.597.7GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.597.7GSM29236435_C097.1F.SLF2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM29216419_C009.1A.R9A2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29411268_3117.2G.R9G2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage