Co-expression analysis

Gene ID PsAffx.psHA003iE02r_s_at
Gene name
Homology with ArabidopsisSimilar to At4g14465: DNA-binding protein-related (HF=7e-5)
Module size 6 genes
NF 0.39
%ile 68.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4766.60.96PsAffx.psHA003iE02r_s_atPsAffx.psHA003iE02r--7e-5At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.6786.10.97Gma.10928.2.S1_a_atBF009414--3e-43At5g62890permease, putativeO.I.H.G.S.X.
0.5071.70.97GmaAffx.80884.1.S1_atBM188324MYB transcription factor MYB51-2e+0At5g58900myb family transcription factorO.I.H.G.S.X.
0.5071.70.97GmaAffx.75395.1.S1_atAW099354--4e-12At2g03480dehydration-responsive protein-relatedO.I.H.G.S.X.
0.2228.10.97GmaAffx.87850.1.S1_atBU080614--6e-14At5g47020glycine-rich proteinO.I.H.G.S.X.
0.1923.70.97GmaAffx.91339.1.S1_atCF807064--1e-9At1g14720XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29387930_2202.2E.R190P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.10349.1.S1_at, orthologous to the query gene, PsAffx.psHA003iE02r_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8395.6Zm.10349.1.S1_atAt4g14465--4e+0At3g04570DNA-binding protein-relatedO.I.H.G.S.X.
0.5775.1Zm.10343.1.S1_atAt4g14465enhancer of zeste1-5e-56At2g23380CLF (CURLY LEAF)O.I.H.G.S.X.
0.5571.6Zm.5822.1.A1_atAt4g14465hypothetical protein LOC100273516-1e-1At1g06420unknown proteinO.I.H.G.S.X.
0.5065.7Zm.13309.1.S1_atAt4g14465hypothetical protein LOC100279717-1e-6At3g58560endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.3641.3Zm.6838.1.A1_atAt4g14465--4e-1Atcg00440-O.I.H.G.S.X.
0.2724.6Zm.13746.1.S1_atAt4g14465pre-mRNA-splicing factor cwc24-4e-11At5g11340GCN5-related N-acetyltransferase (GNAT) family proteinO.I.H.G.S.X.
0.2318.6Zm.5126.1.A1_atAt4g14465--3e-2At5g66560phototropic-responsive NPH3 family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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