Co-expression analysis

Gene ID PsAffx.psHA003iE02r_s_at
Gene name
Homology with ArabidopsisSimilar to At4g14465: DNA-binding protein-related (HF=7e-5)
Module size 6 genes
NF 0.39
%ile 68.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4766.60.96PsAffx.psHA003iE02r_s_atPsAffx.psHA003iE02r--7e-5At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.6786.10.97Gma.10928.2.S1_a_atBF009414--3e-43At5g62890permease, putativeO.I.H.G.S.X.
0.5071.70.97GmaAffx.80884.1.S1_atBM188324MYB transcription factor MYB51-2e+0At5g58900myb family transcription factorO.I.H.G.S.X.
0.5071.70.97GmaAffx.75395.1.S1_atAW099354--4e-12At2g03480dehydration-responsive protein-relatedO.I.H.G.S.X.
0.2228.10.97GmaAffx.87850.1.S1_atBU080614--6e-14At5g47020glycine-rich proteinO.I.H.G.S.X.
0.1923.70.97GmaAffx.91339.1.S1_atCF807064--1e-9At1g14720XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29387930_2202.2E.R190P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.162571.1.A1_at, orthologous to the query gene, PsAffx.psHA003iE02r_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.2PtpAffx.162571.1.A1_atAt4g14465--3e-12At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.7393.6PtpAffx.208025.1.S1_atAt4g14465hypothetical protein-4e-10At1g67030ZFP6 (ZINC FINGER PROTEIN 6)O.I.H.G.S.X.
0.6791.1PtpAffx.47344.1.S1_atAt4g14465white-brown-complex ABC transporter family /// white-brown-complex ABC transporter family-1e-48At1g31770ABC transporter family proteinO.I.H.G.S.X.
0.6791.1PtpAffx.212396.1.S1_atAt4g14465hypothetical protein-7e-10At1g71870MATE efflux family proteinO.I.H.G.S.X.
0.4471.9PtpAffx.215111.1.S1_atAt4g14465hypothetical protein-2e-2At4g17870-O.I.H.G.S.X.
0.3153.7PtpAffx.72354.1.S1_atAt4g14465hypothetical protein-3e+0At4g14104unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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