Co-expression analysis

Gene ID PsAffx.psHA003iE02r_s_at
Gene name
Homology with ArabidopsisSimilar to At4g14465: DNA-binding protein-related (HF=7e-5)
Module size 6 genes
NF 0.39
%ile 68.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4766.60.96PsAffx.psHA003iE02r_s_atPsAffx.psHA003iE02r--7e-5At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.6786.10.97Gma.10928.2.S1_a_atBF009414--3e-43At5g62890permease, putativeO.I.H.G.S.X.
0.5071.70.97GmaAffx.80884.1.S1_atBM188324MYB transcription factor MYB51-2e+0At5g58900myb family transcription factorO.I.H.G.S.X.
0.5071.70.97GmaAffx.75395.1.S1_atAW099354--4e-12At2g03480dehydration-responsive protein-relatedO.I.H.G.S.X.
0.2228.10.97GmaAffx.87850.1.S1_atBU080614--6e-14At5g47020glycine-rich proteinO.I.H.G.S.X.
0.1923.70.97GmaAffx.91339.1.S1_atCF807064--1e-9At1g14720XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.195.8GSM29387930_2202.2E.R190P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At4g14465, orthologous to the query gene, PsAffx.psHA003iE02r_s_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.3338.1At4g14465827093DNA-binding protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO.I.H.G.S.X.
0.4050.8At5g44920834522Toll-Interleukin-Resistance (TIR) domain-containing proteinF:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBOO.I.H.G.S.X.
0.3643.6At1g67030843022ZFP6 (ZINC FINGER PROTEIN 6)Encodes a zinc finger protein containing only a single zinc finger.O.I.H.G.S.X.
0.3338.1At1g10480837588ZFP5 (ZINC FINGER PROTEIN 5)Encodes a zinc finger protein containing only a single zinc finger.O.I.H.G.S.X.
0.2930.3At1g27030839592unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPO.I.H.G.S.X.
0.2930.3At2g04800815024unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.H.G.S.X.
0.2522.6At1g44800841044nodulin MtN21 family proteinF:molecular_function unknown;P:unknown;C:membrane;BOPAMO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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