Co-expression analysis

Gene ID PsAffx.CL898Contig1_at
Gene name
Homology with ArabidopsisSimilar to At5g59990: - (HF=2e+1)
Module size 22 genes
NF 0.36
%ile 65.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.86PsAffx.CL898Contig1_atPsAffx.CL898Contig1--2e+1At5g59990-O.I.H.G.S.X.
0.6282.10.90PsAffx.C152000021_atPsAffx.C152000021--8e-1At5g48485DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)O.I.H.G.S.X.
0.5172.30.94PsAffx.C59000074_atPsAffx.C59000074--1e+1At5g08565positive transcription elongation factor/ zinc ion bindingO.I.H.G.S.X.
0.4968.30.93GmaAffx.39950.1.S1_s_atBE583687--3e+0At2g44770phagocytosis and cell motility protein ELMO1-relatedO.I.H.G.S.X.
0.4766.60.93PsAffx.CL592Contig1_atPsAffx.CL592Contig1--2e+0At3g09890ankyrin repeat family proteinO.I.H.G.S.X.
0.4766.60.94PsAffx.C65000078_atPsAffx.C65000078--1e+0At1g64400long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putativeO.I.H.G.S.X.
0.4563.90.93PsAffx.CL1912Contig1_atPsAffx.CL1912Contig1--2e+0At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.4463.30.94PsAffx.CL1582Contig1_s_atPsAffx.CL1582Contig1--2e+0At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.H.G.S.X.
0.4463.30.92PsAffx.CL183Contig1_atPsAffx.CL183Contig1--2e+0At5g65410HB25 (HOMEOBOX PROTEIN 25)O.I.H.G.S.X.
0.3751.70.94PsAffx.CL1397Contig1_atPsAffx.CL1397Contig1--8e+0At4g17670senescence-associated protein-relatedO.I.H.G.S.X.
0.3548.60.90PsAffx.CL1430Contig1_atPsAffx.CL1430Contig1--1e-3At3g06870proline-rich family proteinO.I.H.G.S.X.
0.3447.20.88PsAffx.psMC009xP14f_s_atPsAffx.psMC009xP14f--3e+0At1g63820-O.I.H.G.S.X.
0.3346.10.94PsAffx.CL1166Contig1_atPsAffx.CL1166Contig1--3e-2At1g47700unknown proteinO.I.H.G.S.X.
0.3243.70.94PsAffx.CL107Contig1_s_atPsAffx.CL107Contig1--4e+0At4g35785nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.3040.40.94PsAffx.C100000012_atPsAffx.C100000012--1e-1At3g52900unknown proteinO.I.H.G.S.X.
0.2839.00.96PsAffx.C24000103_s_atPsAffx.C24000103--6e+0At5g05270chalcone-flavanone isomerase family proteinO.I.H.G.S.X.
0.2735.70.92PsAffx.C56000068_atPsAffx.C56000068--2e-1At1g18680HNH endonuclease domain-containing proteinO.I.H.G.S.X.
0.2329.90.92PsAffx.C240000005_atPsAffx.C240000005--3e-1At2g14260PIPO.I.H.G.S.X.
0.2329.90.95PsAffx.psMY010iB02r_atPsAffx.psMY010iB02r--3e+0At2g26670TED4 (REVERSAL OF THE DET PHENOTYPE 4)O.I.H.G.S.X.
0.2025.10.92PsAffx.C1000200_s_atPsAffx.C1000200--5e-2At1g74920ALDH10A8O.I.H.G.S.X.
0.1721.20.94PsAffx.C361000005_atPsAffx.C361000005--8e-1At3g25030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1114.20.92PsAffx.C317000002_atPsAffx.C317000002--3e-3At3g18780ACT2 (ACTIN 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.599.5GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
11.999.4GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
10.099.3GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.999.0GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.698.9GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.698.9GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.398.9GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.298.9GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.198.8GSM29426220_2405.2I.R084L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.098.8GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.698.7GSM29296644_C221.1M.R9M1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.698.7GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.498.6GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.498.6GSM29415015_3131.2H.R9H1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.398.6GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.298.6GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.798.4GSM29298662_C223.1M.R9M2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.698.3GSM29329477_C067.1P.R9P3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.598.3GSM29323624_1207.1P.R128L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM29307171_1055.1N.R032L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM29324835_1155.1P.R097L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM24489036_SLO.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
5.398.2GSM2923602_C093.1F.R9F1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.198.1GSM17160812_Y.E.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.098.0GSM2449205_VP9.I5L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.397.5GSM29422575_2365.2H.R095L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM29467243_3233.2M.R9M3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29216419_C009.1A.R9A2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM24477810_CON.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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