Co-expression analysis

Gene ID PsAffx.CL577Contig1_at
Gene name
Homology with ArabidopsisSimilar to At5g15960: KIN1 (HF=2e-2)
Module size 21 genes
NF 0.46
%ile 77.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.40.89PsAffx.CL577Contig1_atPsAffx.CL577Contig1--2e-2At5g15960KIN1O.I.H.G.S.X.
0.6886.40.92PsAffx.CL2360Contig1_atPsAffx.CL2360Contig1--2e-1At5g20010RAN-1O.I.H.G.S.X.
0.6583.80.90PsAffx.C21000102_atPsAffx.C21000102--4e+0At5g11500unknown proteinO.I.H.G.S.X.
0.6583.80.93PsAffx.psHB020xH07f_atPsAffx.psHB020xH07f--9e+0At4g29590methyltransferaseO.I.H.G.S.X.
0.5979.50.93PsAffx.CL182Contig1_atPsAffx.CL182Contig1--2e-1At5g46795MSP2 (microspore-specific promoter 2)O.I.H.G.S.X.
0.5678.20.92PsAffx.CL2207Contig1_atPsAffx.CL2207Contig1--3e-1At2g33385arpc2b (actin-related protein C2B)O.I.H.G.S.X.
0.5374.20.94PsAffx.C257000015_s_atPsAffx.C257000015--2e+0At4g01750RGXT2 (rhamnogalacturonan xylosyltransferase 2)O.I.H.G.S.X.
0.5172.30.94PsAffx.CL1416Contig1_atPsAffx.CL1416Contig1--1e-8At2g34250protein transport protein sec61, putativeO.I.H.G.S.X.
0.4968.30.92PsAffx.C167000014_atPsAffx.C167000014--1e+0At2g27930bindingO.I.H.G.S.X.
0.4766.60.93PsAffx.CL869Contig1_atPsAffx.CL869Contig1--2e+0At3g06145unknown proteinO.I.H.G.S.X.
0.4360.60.91PsAffx.CL357Contig1_atPsAffx.CL357Contig1--7e+0At4g24230ACBP3 (ACYL-COA-BINDING DOMAIN 3)O.I.H.G.S.X.
0.4057.10.92PsAffx.CL730Contig1_atPsAffx.CL730Contig1--4e+0At5g37260RVE2 (REVEILLE 2)O.I.H.G.S.X.
0.4057.10.94PsAffx.C103000011_atPsAffx.C103000011--4e+0At5g63905unknown proteinO.I.H.G.S.X.
0.3954.50.95PsAffx.C173000014_atPsAffx.C173000014--3e-1At2g45800LIM domain-containing proteinO.I.H.G.S.X.
0.3954.50.94PsAffx.C55000025_s_atPsAffx.C55000025--5e-1At3g10400RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3853.30.94PsAffx.C190000012_atPsAffx.C190000012--7e+0At4g14740phosphoinositide bindingO.I.H.G.S.X.
0.3650.80.94PsAffx.CL1226Contig1_atPsAffx.CL1226Contig1--2e+0At1g12440zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.3346.10.94PsAffx.CL716Contig1_atPsAffx.CL716Contig1--2e+0At3g01020ISU2 (ISCU-LIKE 2)O.I.H.G.S.X.
0.3346.10.92PsAffx.CL447Contig1_atPsAffx.CL447Contig1--9e-2At4g21740unknown proteinO.I.H.G.S.X.
0.1721.20.93PsAffx.CL134Contig1_atPsAffx.CL134Contig1--5e-1At1g77746unknown proteinO.I.H.G.S.X.
0.1114.20.92PsAffx.CL242Contig1_atPsAffx.CL242Contig1--6e+0At2g42820HVA22F (HVA22-LIKE PROTEIN F)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.399.2GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.899.0GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.398.9GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.198.8GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.698.7GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.498.6GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.198.5GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.198.5GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.098.5GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.098.5GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.998.5GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.998.5GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.898.4GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.698.3GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.298.1GSM17167728_Z.E.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.298.1GSM17166425_Y.E.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.298.1GSM29426220_2405.2I.R084L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.298.1GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.198.1GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.198.1GSM17164621_V.E.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.098.0GSM29296644_C221.1M.R9M1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.098.0GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.098.0GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.098.0GSM29307171_1055.1N.R032L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.098.0GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.998.0GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.897.9GSM17163419_V.F.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.897.9GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.897.9GSM1717126_Y.L.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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