Co-expression analysis

Gene ID PsAffx.CL471Contig1_at
Gene name
Homology with ArabidopsisSimilar to At4g04990: unknown protein (HF=3e-1)
Module size 42 genes
NF 0.39
%ile 68.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9298.90.80PsAffx.CL471Contig1_atPsAffx.CL471Contig1--3e-1At4g04990unknown proteinO.I.H.G.S.X.
0.6080.70.87PsAffx.CL435Contig1_s_atPsAffx.CL435Contig1--2e-1At1g66090disease resistance protein (TIR-NBS class), putativeO.I.H.G.S.X.
0.5778.80.87PsAffx.CL654Contig1_atPsAffx.CL654Contig1--2e+0At3g52010scpl37 (serine carboxypeptidase-like 37)O.I.H.G.S.X.
0.5474.80.87PsAffx.psZG009xD15f_atPsAffx.psZG009xD15f--8e-1At5g07230protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5273.10.92GmaAffx.35370.1.S1_s_atBE583805--1e+1At5g47455unknown proteinO.I.H.G.S.X.
0.5273.10.91PsAffx.C125000015_atPsAffx.C125000015--2e+0At1g20590cyclin, putativeO.I.H.G.S.X.
0.5273.10.91PsAffx.C7000122_atPsAffx.C7000122--5e+0At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)O.I.H.G.S.X.
0.5172.30.93PsAffx.C103000011_atPsAffx.C103000011--4e+0At5g63905unknown proteinO.I.H.G.S.X.
0.5071.70.89PsAffx.psMA012xJ11f_atPsAffx.psMA012xJ11f--3e+0Atmg01030-O.I.H.G.S.X.
0.5071.70.92PsAffx.CL653Contig1_atPsAffx.CL653Contig1--6e-1At2g04925-O.I.H.G.S.X.
0.4867.70.91PsAffx.CL730Contig1_atPsAffx.CL730Contig1--4e+0At5g37260RVE2 (REVEILLE 2)O.I.H.G.S.X.
0.4867.70.91PsAffx.C34000109_s_atPsAffx.C34000109--3e+0At3g16565ATP binding / alanine-tRNA ligase/ nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.4766.60.89PsAffx.CL2235Contig1_atPsAffx.CL2235Contig1--1e+0At3g24490transcription factorO.I.H.G.S.X.
0.4766.60.89PsAffx.CL720Contig1_atPsAffx.CL720Contig1--8e+0At3g43574unknown proteinO.I.H.G.S.X.
0.4766.60.86PsAffx.C67000033_atPsAffx.C67000033--4e+0At2g29790-O.I.H.G.S.X.
0.4665.50.91PsAffx.CL2001Contig1_atPsAffx.CL2001Contig1--4e+0At1g25250AtIDD16 (Arabidopsis thaliana Indeterminate(ID)-Domain 16)O.I.H.G.S.X.
0.4665.50.92PsAffx.C29000074_atPsAffx.C29000074--5e+0At5g35475-O.I.H.G.S.X.
0.4563.90.83PsAffx.psHB008xD07f_s_atPsAffx.psHB008xD07f--2e-1At2g40802unknown proteinO.I.H.G.S.X.
0.4360.60.89PsAffx.CL982Contig1_atPsAffx.CL982Contig1--2e+1At5g06240emb2735 (embryo defective 2735)O.I.H.G.S.X.
0.4259.30.87PsAffx.C269000011_atPsAffx.C269000011--9e-2At4g32780phosphoinositide bindingO.I.H.G.S.X.
0.4158.10.91PsAffx.CL2324Contig1_atPsAffx.CL2324Contig1--9e-1At5g51650unknown proteinO.I.H.G.S.X.
0.4158.10.90PsAffx.C50000062_atPsAffx.C50000062--1e+0At3g10300calcium-binding EF hand family proteinO.I.H.G.S.X.
0.4057.10.88PsAffx.C112000050_s_atPsAffx.C112000050--2e-1At5g54250ATCNGC4 (CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4)O.I.H.G.S.X.
0.4057.10.86PsAffx.C117000036_atPsAffx.C117000036--2e+0At2g33620DNA-binding family protein / AT-hook protein 1 (AHP1)O.I.H.G.S.X.
0.3650.80.91PsAffx.C215000004_atPsAffx.C215000004--8e-2At3g53470unknown proteinO.I.H.G.S.X.
0.3447.20.92PsAffx.C277000003_s_atPsAffx.C277000003--8e-2At3g15060AtRABA1g (Arabidopsis Rab GTPase homolog A1g)O.I.H.G.S.X.
0.3447.20.91PsAffx.CL182Contig1_atPsAffx.CL182Contig1--2e-1At5g46795MSP2 (microspore-specific promoter 2)O.I.H.G.S.X.
0.3346.10.86PsAffx.C1000261_atPsAffx.C1000261--1e-15At5g10980histone H3O.I.H.G.S.X.
0.3346.10.85PsAffx.C38000108_atPsAffx.C38000108--9e+0At4g15765electron carrier/ monooxygenase/ oxidoreductaseO.I.H.G.S.X.
0.3243.70.91PsAffx.CL860Contig1_atPsAffx.CL860Contig1--8e-2At2g4051040S ribosomal protein S26 (RPS26A)O.I.H.G.S.X.
0.3040.40.92PsAffx.CL1416Contig1_atPsAffx.CL1416Contig1--1e-8At2g34250protein transport protein sec61, putativeO.I.H.G.S.X.
0.3040.40.91PsAffx.C135000021_atPsAffx.C135000021--4e-2At5g42790PAF1O.I.H.G.S.X.
0.2939.00.89PsAffx.C13000120_atPsAffx.C13000120--5e+0At1g14687AtHB32 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 32)O.I.H.G.S.X.
0.2939.00.92PsAffx.C97000022_atPsAffx.C97000022--6e+0At4g16500cysteine protease inhibitor family protein / cystatin family proteinO.I.H.G.S.X.
0.2839.00.92PsAffx.C257000015_s_atPsAffx.C257000015--2e+0At4g01750RGXT2 (rhamnogalacturonan xylosyltransferase 2)O.I.H.G.S.X.
0.2839.00.91PsAffx.C200000014_atPsAffx.C200000014--1e-1At3g14130(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.2735.70.92PsAffx.psMC003xP07f_atPsAffx.psMC003xP07f--9e+0At4g28440DNA-binding protein-relatedO.I.H.G.S.X.
0.2532.60.91PsAffx.CL864Contig1_atPsAffx.CL864Contig1--6e+0At1g26665-O.I.H.G.S.X.
0.2532.60.86PsAffx.C279000007_atPsAffx.C279000007--3e+0At5g21274CAM6 (CALMODULIN 6)O.I.H.G.S.X.
0.2025.10.91GmaAffx.80926.1.S1_s_atBE584193--1e+1At3g02310SEP2 (SEPALLATA 2)O.I.H.G.S.X.
0.1923.70.90PsAffx.C26000021_atPsAffx.C26000021--2e+0At1g67860unknown proteinO.I.H.G.S.X.
0.1923.70.91PsAffx.CL429Contig1_atPsAffx.CL429Contig1--3e-1At3g06040ribosomal protein L12 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.599.3GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
8.399.1GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.298.6GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.598.3GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.398.2GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.198.1GSM17160812_Y.E.I.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.198.1GSM24489036_SLO.I2W2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
5.098.0GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.098.0GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.998.0GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.897.9GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM29426220_2405.2I.R084L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.697.7GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.697.7GSM29307171_1055.1N.R032L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.697.7GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.597.7GSM29296644_C221.1M.R9M1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.597.7GSM29415015_3131.2H.R9H1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.597.7GSM29324835_1155.1P.R097L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.597.7GSM29329477_C067.1P.R9P3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.497.6GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.297.4GSM29323624_1207.1P.R128L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29340890_C079.1Q.R9Q2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM2923602_C093.1F.R9F1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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