Co-expression analysis

Gene ID	PsAffx.CL2100Contig1_at
Gene name
Homology with Arabidopsis	Similar to At5g57181: unknown protein (HF=5e+0)
Module size	6 genes
NF	0.14
%ile	35.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.72	PsAffx.CL2100Contig1_at	PsAffx.CL2100Contig1	-	-	5e+0	At5g57181	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.94	GmaAffx.85491.1.S1_s_at	BE583694	-	-	1e+1	At5g26692	-	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.94	PsAffx.psHB028xM12f_s_at	PsAffx.psHB028xM12f	-	-	2e+0	At2g18020	EMB2296 (embryo defective 2296)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.94	HgAffx.16208.1.S1_at	CB935526	-	-	5e+0	At5g55750	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.94	HgAffx.9055.1.S1_at	CB379446	-	-	2e+0	At5g49015	Expressed protein	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.95	HgAffx.17965.1.S1_at	CB278425	-	-	2e+0	At2g23340	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.3	98.6	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.7	97.8	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
4.5	97.7	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM294431	86_2456.2J.R220P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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