Co-expression analysis

Gene ID PsAffx.CL1410Contig1_at
Gene name
Homology with ArabidopsisSimilar to At5g42785: unknown protein (HF=8e+0)
Module size 45 genes
NF 0.57
%ile 87.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.94PsAffx.CL1410Contig1_atPsAffx.CL1410Contig1--8e+0At5g42785unknown proteinO.I.H.G.S.X.
0.7890.60.95GmaAffx.35376.1.S1_s_atBE583904--1e+1At4g30180transcription factor/ transcription regulatorO.I.H.G.S.X.
0.7790.30.95PsAffx.C43000029_atPsAffx.C43000029--3e+0At3g25920RPL15O.I.H.G.S.X.
0.7790.30.94PsAffx.CL386Contig1_atPsAffx.CL386Contig1--2e+0At5g18920unknown proteinO.I.H.G.S.X.
0.7589.50.95PsAffx.CL795Contig1_atPsAffx.CL795Contig1--3e+0At5g23160unknown proteinO.I.H.G.S.X.
0.7288.10.94PsAffx.CL894Contig1_atPsAffx.CL894Contig1--3e+0At2g22240MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2)O.I.H.G.S.X.
0.7288.10.95PsAffx.CL344Contig1_atPsAffx.CL344Contig1--2e+0At5g42190ASK2 (ARABIDOPSIS SKP1-LIKE 2)O.I.H.G.S.X.
0.7187.80.96PsAffx.CL1432Contig1_atPsAffx.CL1432Contig1--2e+0At5g53220unknown proteinO.I.H.G.S.X.
0.7087.10.97PsAffx.CL13Contig1_atPsAffx.CL13Contig1--7e-2At5g4004060S acidic ribosomal protein P2 (RPP2E)O.I.H.G.S.X.
0.6786.10.95PsAffx.CL64Contig2_atPsAffx.CL64Contig2--8e+0At5g02800protein kinase family proteinO.I.H.G.S.X.
0.6583.80.95PsAffx.C18000032_s_atPsAffx.C18000032--3e+0At3g32330DNA repair protein-relatedO.I.H.G.S.X.
0.6382.90.96GmaAffx.62777.1.S1_s_atBE583952--1e+1At5g02710unknown proteinO.I.H.G.S.X.
0.6382.90.96PsAffx.CL188Contig1_atPsAffx.CL188Contig1--6e+0At5g13100unknown proteinO.I.H.G.S.X.
0.6382.90.94PsAffx.CL331Contig1_atPsAffx.CL331Contig1--6e-1At3g03630CS26O.I.H.G.S.X.
0.6282.10.97PsAffx.C65000037_s_atPsAffx.C65000037--9e-10At5g08680ATP synthase beta chain, mitochondrial, putativeO.I.H.G.S.X.
0.6282.10.95PsAffx.C257000022_atPsAffx.C257000022--3e-2At1g04690KAB1 (POTASSIUM CHANNEL BETA SUBUNIT)O.I.H.G.S.X.
0.6080.70.96PsAffx.CL123Contig1_atPsAffx.CL123Contig1--2e+0At1g53625unknown proteinO.I.H.G.S.X.
0.5979.50.95PsAffx.CL113Contig1_s_atPsAffx.CL113Contig1--7e-1At2g38480integral membrane protein, putativeO.I.H.G.S.X.
0.5878.80.95PsAffx.CL87Contig2_s_atPsAffx.CL87Contig2--1e+0At1g60010unknown proteinO.I.H.G.S.X.
0.5878.80.96PsAffx.CL57Contig2_s_atPsAffx.CL57Contig2--3e-4At1g77930DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.5878.80.96PsAffx.CL216Contig1_atPsAffx.CL216Contig1--2e+0At1g52905unknown proteinO.I.H.G.S.X.
0.5878.80.95PsAffx.CL64Contig1_s_atPsAffx.CL64Contig1--4e-1At1g07860unknown proteinO.I.H.G.S.X.
0.5778.80.96PsAffx.CL414Contig1_atPsAffx.CL414Contig1--5e+0At3g15395unknown proteinO.I.H.G.S.X.
0.5678.20.96PsAffx.CL221Contig1_atPsAffx.CL221Contig1--2e+0At5g24460unknown proteinO.I.H.G.S.X.
0.5576.30.97PsAffx.CL199Contig1_atPsAffx.CL199Contig1--2e+0At4g19740catalytic/ cation binding / chitinase/ hydrolase, hydrolyzing O-glycosyl compoundsO.I.H.G.S.X.
0.5576.30.96PsAffx.CL569Contig1_atPsAffx.CL569Contig1--1e-4At5g40580PBB2O.I.H.G.S.X.
0.5474.80.96PsAffx.CL321Contig1_atPsAffx.CL321Contig1--7e+0At2g05510glycine-rich proteinO.I.H.G.S.X.
0.5474.80.96PsAffx.CL176Contig1_s_atPsAffx.CL176Contig1--4e+0At3g07430emb1990 (embryo defective 1990)O.I.H.G.S.X.
0.5474.80.95GmaAffx.44536.1.S1_s_atBE583800--6e-1At1g35420dienelactone hydrolase family proteinO.I.H.G.S.X.
0.5172.30.97PsAffx.psML008xI07f_s_atPsAffx.psML008xI07f--6e-1At4g26930MYB97 (myb domain protein 97)O.I.H.G.S.X.
0.5071.70.97PsAffx.CL74Contig1_atPsAffx.CL74Contig1--4e-16At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.4968.30.96PsAffx.CL57Contig1_atPsAffx.CL57Contig1--6e-4At1g77930DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4867.70.95PsAffx.CL2Contig20_atPsAffx.CL2Contig20--5e+0At1g51240-O.I.H.G.S.X.
0.4867.70.97PsAffx.CL111Contig1_atPsAffx.CL111Contig1--9e+0At3g02000ROXY1O.I.H.G.S.X.
0.4766.60.96PsAffx.CL1316Contig1_s_atPsAffx.CL1316Contig1--3e-1At2g27580zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.4665.50.96PsAffx.C263000004_atPsAffx.C263000004--4e-1At2g23780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4665.50.95PsAffx.CL12Contig3_atPsAffx.CL12Contig3--6e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.4563.90.97PsAffx.CL136Contig1_atPsAffx.CL136Contig1--2e+0At1g28580GDSL-motif lipase, putativeO.I.H.G.S.X.
0.4463.30.96PsAffx.CL377Contig1_atPsAffx.CL377Contig1--8e+0At5g58640selenoprotein-relatedO.I.H.G.S.X.
0.4360.60.96PsAffx.CL294Contig1_atPsAffx.CL294Contig1--2e+0At3g14290PAE2O.I.H.G.S.X.
0.4057.10.97PsAffx.CL175Contig1_atPsAffx.CL175Contig1--2e+0At1g49150unknown proteinO.I.H.G.S.X.
0.3954.50.96PsAffx.CL2Contig13_s_atPsAffx.CL2Contig13--3e+0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.3853.30.97PsAffx.C191000027_atPsAffx.C191000027--7e-1At2g20420succinyl-CoA ligase (GDP-forming) beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putativeO.I.H.G.S.X.
0.3346.10.96PsAffx.CL122Contig1_atPsAffx.CL122Contig1--1e-1At3g56350superoxide dismutase (Mn), putative / manganese superoxide dismutase, putativeO.I.H.G.S.X.
0.3142.20.96PsAffx.CL89Contig1_atPsAffx.CL89Contig1--2e-1At1g59900AT-E1 ALPHAO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.399.5GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
10.999.4GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
9.099.2GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.799.0GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.698.9GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.498.9GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.398.9GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.298.9GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.898.7GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.698.7GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.498.6GSM29296644_C221.1M.R9M1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.398.6GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.298.6GSM29415015_3131.2H.R9H1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.198.5GSM29329477_C067.1P.R9P3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.198.5GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.198.5GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29307171_1055.1N.R032L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.098.5GSM29426220_2405.2I.R084L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.998.5GSM2923602_C093.1F.R9F1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.898.4GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.798.4GSM2930807_C033.1N.R9N3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.798.4GSM29324835_1155.1P.R097L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.698.3GSM29323624_1207.1P.R128L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.598.3GSM29298662_C223.1M.R9M2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.498.2GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.298.1GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.298.1GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.897.9GSM17167728_Z.E.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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