Co-expression analysis

Gene ID	PsAffx.C85000046_at
Gene name
Homology with Arabidopsis	Similar to At3g43829: unknown protein (HF=6e+0)
Module size	6 genes
NF	0.01
%ile	5.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.60	PsAffx.C85000046_at	PsAffx.C85000046	-	-	6e+0	At3g43829	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.81	PsAffx.C799000001_at	PsAffx.C799000001	-	-	5e+0	At1g67775	CLE8 (CLAVATA3/ESR-RELATED 8)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.85	PsAffx.C99000057_at	PsAffx.C99000057	-	-	2e+0	At5g04490	VTE5 (vitamin E pathway gene5)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.83	PsAffx.C15000001_s_at	PsAffx.C15000001	-	-	2e+0	At2g01670	atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17)	O.I.	H.G.	S.X.	Please select
-	1.4	0.82	PsAffx.C8000052_at	PsAffx.C8000052	-	-	4e-1	At2g15280	reticulon family protein (RTNLB10)	O.I.	H.G.	S.X.	Please select
-	1.4	0.76	HgAffx.16579.1.S1_at	CB279777	-	-	9e-1	At4g13200	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.7	99.7	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.0	99.6	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.2	99.0	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.0	99.0	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.1	98.8	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.0	98.8	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.2	98.1	GSM244813	18_VP9.I5U4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
4.0	97.2	GSM293195	77_1130.1O.R082P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292229	25_C029.1B.R9B2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM182032	Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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