Co-expression analysis

Gene ID PsAffx.C73000046_at
Gene name
Homology with ArabidopsisSimilar to At4g13500: unknown protein (HF=9e+0)
Module size 6 genes
NF 0.01
%ile 3.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.80PsAffx.C73000046_atPsAffx.C73000046--9e+0At4g13500unknown proteinO.I.H.G.S.X.
0.3548.60.93PsAffx.C167000011_atPsAffx.C167000011--3e-1At3g05760nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.2228.10.93PsAffx.C15000066_atPsAffx.C15000066--6e+0At5g55250IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1)O.I.H.G.S.X.
0.1013.00.93HgAffx.21514.1.S1_atCD749005--5e-1At5g45875SCRL27 (SCR-Like 27)O.I.H.G.S.X.
0.0710.20.93PsAffx.CL1693Contig1_atPsAffx.CL1693Contig1--6e+0At5g20190bindingO.I.H.G.S.X.
-1.40.93GmaAffx.99.2.A1_s_atBE330213Translationally controlled tumor-like protein-3e-1At3g26670-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.297.4GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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