Co-expression analysis

Gene ID	PsAffx.C64000001_at
Gene name
Homology with Arabidopsis	Similar to At2g31370: bZIP transcription factor (POSF21) (HF=4e-1)
Module size	28 genes
NF	0.47
%ile	77.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.95	99.4	0.81	PsAffx.C64000001_at	PsAffx.C64000001	-	-	4e-1	At2g31370	bZIP transcription factor (POSF21)	O.I.	H.G.	S.X.	Please select
0.79	90.8	0.90	PsAffx.C66000075_at	PsAffx.C66000075	-	-	7e+0	At5g10430	AGP4 (ARABINOGALACTAN PROTEIN 4)	O.I.	H.G.	S.X.	Please select
0.75	89.5	0.87	PsAffx.CL1922Contig1_at	PsAffx.CL1922Contig1	-	-	2e+0	At5g17090	-	O.I.	H.G.	S.X.	Please select
0.72	88.1	0.91	PsAffx.C207000019_at	PsAffx.C207000019	-	-	8e+0	At5g24540	BGLU31 (BETA GLUCOSIDASE 31)	O.I.	H.G.	S.X.	Please select
0.69	86.8	0.90	PsAffx.C18000086_at	PsAffx.C18000086	-	-	4e-1	At1g69490	NAP (NAC-like, activated by AP3/PI)	O.I.	H.G.	S.X.	Please select
0.64	83.4	0.89	PsAffx.CL459Contig1_at	PsAffx.CL459Contig1	-	-	8e-2	At5g07600	oleosin / glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.91	PsAffx.CL2584Contig1_at	PsAffx.CL2584Contig1	-	-	1e-1	At3g09890	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.62	82.1	0.90	PsAffx.C98000055_at	PsAffx.C98000055	-	-	2e-1	At1g30260	-	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.93	PsAffx.C217000003_at	PsAffx.C217000003	-	-	8e-1	At1g02065	SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.91	PsAffx.C30000032_at	PsAffx.C30000032	-	-	4e+0	At4g37450	AGP18 (ARABINOGALACTAN PROTEIN 18)	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.88	PsAffx.C82000035_at	PsAffx.C82000035	-	-	1e+1	At5g09510	40S ribosomal protein S15 (RPS15D)	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.87	PsAffx.C17000033_at	PsAffx.C17000033	-	-	5e-2	At1g21620	APUM20 (Arabidopsis Pumilio 20)	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.90	PsAffx.CL908Contig1_s_at	PsAffx.CL908Contig1	-	-	1e+0	At5g46030	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.88	PsAffx.psHA001iC01r_at	PsAffx.psHA001iC01r	-	-	7e-2	At2g19040	RALFL12 (RALF-LIKE 12)	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.90	PsAffx.C141000043_at	PsAffx.C141000043	-	-	2e-1	At1g74440	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.91	PsAffx.HisK-2_at	PsAffx.HisK-2	-	-	1e+0	At5g22930	unknown protein	O.I.	H.G.	S.X.	Please select
0.51	72.3	0.89	PsAffx.CL851Contig1_at	PsAffx.CL851Contig1	-	-	4e-1	At2g18030	peptide methionine sulfoxide reductase family protein	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.89	PsAffx.C143000008_at	PsAffx.C143000008	-	-	9e+0	At3g29040	protein serine/threonine kinase	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.89	PsAffx.CL1541Contig1_at	PsAffx.CL1541Contig1	-	-	1e+1	At3g06300	AT-P4H-2 (A. THALIANA P4H ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.89	PsAffx.CL799Contig1_at	PsAffx.CL799Contig1	-	-	5e+0	At3g11260	WOX5 (WUSCHEL RELATED HOMEOBOX 5)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.88	PsAffx.C138000009_at	PsAffx.C138000009	-	-	9e+0	At5g59280	APUM16 (Arabidopsis Pumilio 16)	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.87	PsAffx.C136000037_at	PsAffx.C136000037	-	-	1e-1	At1g75550	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.91	PsAffx.psML010xA22f_s_at	PsAffx.psML010xA22f	-	-	1e+0	At3g53235	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.90	PsAffx.C21000034_at	PsAffx.C21000034	-	-	8e-1	At2g33835	FES1	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.90	PsAffx.C37000041_at	PsAffx.C37000041	-	-	3e-1	At1g13760	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.92	PsAffx.C37000045_at	PsAffx.C37000045	-	-	9e+0	At5g52200	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.91	PsAffx.psMA002xD04f_s_at	PsAffx.psMA002xD04f	-	-	3e-1	At5g38070	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.88	PsAffx.CL929Contig1_at	PsAffx.CL929Contig1	-	-	2e+0	At4g34970	ADF9 (ACTIN DEPOLYMERIZING FACTOR 9)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.3	99.5	GSM171675	28_W.I.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
12.2	99.5	GSM171611	13_W.E.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
11.0	99.4	GSM171619	15_W.F.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.9	99.4	GSM171660	24_Y.I.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.8	99.4	GSM171680	29_Y.F.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
10.7	99.4	GSM171693	31_Z.I.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.4	99.2	GSM171606	12_V.I.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.3	99.2	GSM171677	28_Z.E.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.3	99.2	GSM171725	9_Z.F.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.2	99.2	GSM171664	25_Y.E.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
9.0	99.2	GSM171634	19_V.F.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.7	99.1	GSM171646	21_V.E.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.2	99.0	GSM171599	10_W.I.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.1	99.0	GSM171685	2_Z.L.M.5, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
8.1	99.0	GSM171712	6_Y.L.M.5, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.7	99.0	GSM171719	8_W.L.M.5, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
7.1	98.8	GSM171710	6_V.L.M.5, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
6.0	98.5	GSM171671	27_W.E.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.9	98.5	GSM171656	23_Y.E.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.6	98.3	GSM171676	28_Y.I.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.4	98.2	GSM171641	1_Z.I.M.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.4	98.2	GSM171687	30_W.F.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.4	98.2	GSM171633	18_Y.F.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.2	98.1	GSM171604	11_Y.L.M.3, Experimental replicate Y	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.0	98.0	GSM171681	29_Z.L.M.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
5.0	98.0	GSM171627	17_W.L.M.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.8	97.9	GSM171631	18_V.I.M.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.5	97.7	GSM171721	8_Z.E.M.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.4	97.6	GSM171694	32_V.L.M.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
4.0	97.2	GSM171618	15_V.E.M.3, Experimental replicate V	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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