Co-expression analysis

Gene ID PsAffx.C608000003_at
Gene name
Homology with ArabidopsisSimilar to At1g31070: UDP-N-acetylglucosamine pyrophosphorylase-related (HF=5e+0)
Module size 6 genes
NF 0.43
%ile 73.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.81PsAffx.C608000003_atPsAffx.C608000003--5e+0At1g31070UDP-N-acetylglucosamine pyrophosphorylase-relatedO.I.H.G.S.X.
0.6786.10.93PsAffx.C5000113_atPsAffx.C5000113--2e-2At1g80410EMB2753 (EMBRYO DEFECTIVE 2753)O.I.H.G.S.X.
0.6786.10.93PsAffx.CL2391Contig1_atPsAffx.CL2391Contig1--1e+0At4g22460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3142.20.93PsAffx.C84000055_atPsAffx.C84000055--8e-1At1g16230syntaxin-related family proteinO.I.H.G.S.X.
0.2735.70.93PsAffx.psMA013xP16f_atPsAffx.psMA013xP16f--3e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.1518.70.93PsAffx.CL1570Contig1_atPsAffx.CL1570Contig1--5e-1At3g2483060S ribosomal protein L13A (RPL13aB)O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.397.5GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.396.2GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM2449205_VP9.I5L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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