Co-expression analysis

Gene ID PsAffx.C5000113_at
Gene name
Homology with ArabidopsisSimilar to At1g80410: EMB2753 (EMBRYO DEFECTIVE 2753) (HF=2e-2)
Module size 13 genes
NF 0.74
%ile 96.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.80.91PsAffx.C5000113_atPsAffx.C5000113--2e-2At1g80410EMB2753 (EMBRYO DEFECTIVE 2753)O.I.H.G.S.X.
0.8592.80.92PsAffx.C161000037_s_atPsAffx.C161000037--4e+0At5g42780AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)O.I.H.G.S.X.
0.8592.80.93PsAffx.psMA013xP16f_atPsAffx.psMA013xP16f--3e-1At2g30560glycine-rich proteinO.I.H.G.S.X.
0.8392.50.93PsAffx.CL1586Contig1_atPsAffx.CL1586Contig1--6e+0At4g03950glucose-6-phosphate/phosphate translocator, putativeO.I.H.G.S.X.
0.7990.80.92PsAffx.C94000056_atPsAffx.C94000056--7e-1At4g13200unknown proteinO.I.H.G.S.X.
0.7489.20.92PsAffx.C84000055_atPsAffx.C84000055--8e-1At1g16230syntaxin-related family proteinO.I.H.G.S.X.
0.7489.20.93PsAffx.C338000008_atPsAffx.C338000008--3e+0At5g58540protein kinase family proteinO.I.H.G.S.X.
0.7087.10.94PsAffx.C61000020_atPsAffx.C61000020--9e-1At5g19030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.6986.80.92PsAffx.C94000055_s_atPsAffx.C94000055--2e-8At3g18600DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.6786.10.94PsAffx.C22000090_atPsAffx.C22000090--3e-2At5g55690MADS-box protein (AGL47)O.I.H.G.S.X.
0.6583.80.93PsAffx.C18000094_s_atPsAffx.C18000094--3e+0At4g02715unknown proteinO.I.H.G.S.X.
0.5979.50.93PsAffx.C417000001_atPsAffx.C417000001--3e-1At1g55130endomembrane protein 70, putativeO.I.H.G.S.X.
0.5678.20.93PsAffx.CL1570Contig1_atPsAffx.CL1570Contig1--5e-1At3g2483060S ribosomal protein L13A (RPL13aB)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.999.0GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
7.598.9GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.198.5GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.998.5GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.698.3GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.698.3GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.498.2GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.098.0GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.098.0GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.998.0GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.797.8GSM2449205_VP9.I5L2.CEL, Experimental replicate 2GSE9687Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistanceLink to GEO
4.797.8GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.597.7GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM17166425_Y.E.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.397.5GSM29238459_C093.1F.R9F1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM17164621_V.E.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.297.4GSM29296644_C221.1M.R9M1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.297.4GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
4.097.2GSM29426220_2405.2I.R084L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29319476_1133.1O.R084L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM17167728_Z.E.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.997.1GSM1717126_Y.L.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.997.1GSM17163419_V.F.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.897.0GSM29307171_1055.1N.R032L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29375688_2113.2C.R285L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM1717198_W.L.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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