Co-expression analysis

Gene ID PsAffx.C3000137_at
Gene name
Homology with ArabidopsisSimilar to At3g60540: sec61beta family protein (HF=5e+0)
Module size 23 genes
NF 0.56
%ile 86.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.60.79PsAffx.C3000137_atPsAffx.C3000137--5e+0At3g60540sec61beta family proteinO.I.H.G.S.X.
0.7890.60.88PsAffx.CL109Contig2_atPsAffx.CL109Contig2--2e-2At5g062902-Cys Prx B (2-Cysteine peroxiredoxin B)O.I.H.G.S.X.
0.7388.90.89PsAffx.C115000014_atPsAffx.C115000014--7e+0At5g6751060S ribosomal protein L26 (RPL26B)O.I.H.G.S.X.
0.7388.90.92PsAffx.C141000043_atPsAffx.C141000043--2e-1At1g74440unknown proteinO.I.H.G.S.X.
0.6583.80.88PsAffx.C17000033_atPsAffx.C17000033--5e-2At1g21620APUM20 (Arabidopsis Pumilio 20)O.I.H.G.S.X.
0.6181.80.90PsAffx.C24000006_atPsAffx.C24000006--9e+0At5g66658unknown proteinO.I.H.G.S.X.
0.6080.70.90PsAffx.CL851Contig1_atPsAffx.CL851Contig1--4e-1At2g18030peptide methionine sulfoxide reductase family proteinO.I.H.G.S.X.
0.5678.20.90PsAffx.CL1541Contig1_atPsAffx.CL1541Contig1--1e+1At3g06300AT-P4H-2 (A. THALIANA P4H ISOFORM 2)O.I.H.G.S.X.
0.5678.20.91PsAffx.CL666Contig1_atPsAffx.CL666Contig1--2e+0At4g28840unknown proteinO.I.H.G.S.X.
0.5678.20.91PsAffx.C30000032_atPsAffx.C30000032--4e+0At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)O.I.H.G.S.X.
0.5576.30.89PsAffx.C66000075_atPsAffx.C66000075--7e+0At5g10430AGP4 (ARABINOGALACTAN PROTEIN 4)O.I.H.G.S.X.
0.5576.30.91PsAffx.C68000043_s_atPsAffx.C68000043--5e-1At2g24310unknown proteinO.I.H.G.S.X.
0.5576.30.88PsAffx.C136000037_atPsAffx.C136000037--1e-1At1g75550glycine-rich proteinO.I.H.G.S.X.
0.5474.80.91PsAffx.C21000034_atPsAffx.C21000034--8e-1At2g33835FES1O.I.H.G.S.X.
0.5374.20.90PsAffx.C207000019_atPsAffx.C207000019--8e+0At5g24540BGLU31 (BETA GLUCOSIDASE 31)O.I.H.G.S.X.
0.5071.70.90PsAffx.C220000010_atPsAffx.C220000010--3e-1At1g75170SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.4766.60.92PsAffx.CL1471Contig1_atPsAffx.CL1471Contig1--3e-1At3g29780RALFL27 (ralf-like 27)O.I.H.G.S.X.
0.4665.50.90PsAffx.CL908Contig1_s_atPsAffx.CL908Contig1--1e+0At5g46030unknown proteinO.I.H.G.S.X.
0.4463.30.90PsAffx.psHB040xF22f_s_atPsAffx.psHB040xF22f--1e+1At5g05360unknown proteinO.I.H.G.S.X.
0.4463.30.88PsAffx.C62000032_atPsAffx.C62000032--6e+0At4g27660unknown proteinO.I.H.G.S.X.
0.4259.30.92PsAffx.C217000003_atPsAffx.C217000003--8e-1At1g02065SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)O.I.H.G.S.X.
0.3650.80.92PsAffx.C203000005_s_atPsAffx.C203000005--2e-1At3g09032unknown proteinO.I.H.G.S.X.
0.1316.30.91PsAffx.C95000059_atPsAffx.C95000059--2e+0At5g15640mitochondrial substrate carrier family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.199.5GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
11.599.4GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
10.599.3GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
10.399.3GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
10.299.3GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
9.899.3GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.699.1GSM17166425_Y.E.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.699.1GSM17167728_Z.E.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.599.1GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.399.1GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.299.0GSM17164621_V.E.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
8.199.0GSM17163419_V.F.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.799.0GSM1717126_Y.L.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.298.9GSM17159910_W.I.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.198.8GSM1716852_Z.L.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.098.8GSM1717198_W.L.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.398.6GSM1717106_V.L.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.798.4GSM17165623_Y.E.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.198.1GSM17167127_W.E.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.098.0GSM17167628_Y.I.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.998.0GSM1716411_Z.I.M.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.897.9GSM17160411_Y.L.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.897.9GSM17168730_W.F.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.897.9GSM17163318_Y.F.M.3, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.597.7GSM17169432_V.L.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.497.6GSM17168129_Z.L.M.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.397.5GSM17163118_V.I.M.3, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.397.5GSM17162717_W.L.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.297.4GSM1717218_Z.E.M.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
3.796.8GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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