Co-expression analysis

Gene ID PsAffx.C3000058_at
Gene name
Homology with ArabidopsisSimilar to At1g52500: ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1) (HF=3e-1)
Module size 11 genes
NF 0.31
%ile 57.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4057.10.70PsAffx.C3000058_atPsAffx.C3000058--3e-1At1g52500ATMMH-1 (ARABIDOPSIS THALIANA MUTM HOMOLOG-1)O.I.H.G.S.X.
0.6080.70.79GmaAffx.60715.1.S1_x_atBU089784--5e+0At5g53400nuclear movement family proteinO.I.H.G.S.X.
0.6080.70.84HgAffx.3584.1.A1_s_atCK349106--2e+0At2g37110unknown proteinO.I.H.G.S.X.
0.5979.50.78HgAffx.3643.1.A1_atCK349047--7e-1At1g05070unknown proteinO.I.H.G.S.X.
0.5576.30.77HgAffx.13905.6.S1_s_atCB378944--5e+0At4g25550protein bindingO.I.H.G.S.X.
0.5576.30.81GmaAffx.60715.1.S1_atBU089784--5e+0At5g53400nuclear movement family proteinO.I.H.G.S.X.
0.4259.30.79HgAffx.3851.1.A1_atCK348839--2e+1At5g66005Expressed proteinO.I.H.G.S.X.
0.4057.10.81HgAffx.19033.4.S1_s_atCK350593--6e-2At1g54410dehydrin family proteinO.I.H.G.S.X.
0.3040.40.73HgAffx.20910.1.S1_atBI748843--8e-1At1g55670PSAG (PHOTOSYSTEM I SUBUNIT G)O.I.H.G.S.X.
0.2126.60.74PsAffx.psMC009xE23f_atPsAffx.psMC009xE23f--1e+1At5g03550-O.I.H.G.S.X.
0.0811.00.71PsAffx.psZS014xC15f_s_atPsAffx.psZS014xC15f--1e+1At3g03000calmodulin, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.398.2GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.398.2GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.298.1GSM29442883_2450.2J.R161P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.098.0GSM29442782_2447.2J.R119L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.797.8GSM29442379_2455.2J.R220L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.497.6GSM2943803_2464.2J.R260P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29441672_2472.2J.R108P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29442580_3168.2J.R9J1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29442984_2437.2J.R091U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.397.5GSM29443791_2465.2J.R186U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.297.4GSM29443690_2445.2J.R294U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29442681_3163.2J.SLJ1U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29443186_2456.2J.R220P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29443287_3176.2J.SLJ3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.097.2GSM29442177_2442.2J.R198P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29440360_2462.2J.R176P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM2943692_2439.2J.R135L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29435214_2471.2J.R108L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29443085_2455.2J.R220U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.997.1GSM29443388_3173.2J.SLJ2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29435113_2475.2J.R081U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29434911_2465.2J.R186L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29437535_2473.2J.R052L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29439755_2458.2J.R073P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29448954_3198.2K.R9K3P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM29440966_3169.2J.R9J2U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.796.8GSM147956Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.796.8GSM29442076_2449.2J.R161U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.696.7GSM29442278_2467.2J.R216U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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