Co-expression analysis

Gene ID PsAffx.C25000032_at
Gene name
Homology with ArabidopsisSimilar to At5g10140: FLC (FLOWERING LOCUS C) (HF=2e-1)
Module size 6 genes
NF 0.25
%ile 49.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.80PsAffx.C25000032_atPsAffx.C25000032--2e-1At5g10140FLC (FLOWERING LOCUS C)O.I.H.G.S.X.
0.3650.80.98Gma.5793.4.S1_x_atBI967780--8e-19At3g61430PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A)O.I.H.G.S.X.
0.2735.70.98GmaAffx.92103.1.S1_s_atCF806493translationally controlled tumor-like protein-6e-28At3g16640TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)O.I.H.G.S.X.
0.2126.60.92PsAffx.C167000011_atPsAffx.C167000011--3e-1At3g05760nucleic acid binding / zinc ion bindingO.I.H.G.S.X.
0.1721.20.98GmaAffx.99.2.A1_s_atBE330213Translationally controlled tumor-like protein-3e-1At3g26670-O.I.H.G.S.X.
0.0912.00.97GmaAffx.92838.1.S1_s_atCF806809hydroxyproline-rich glycoprotein-3e-2At1g23720proline-rich extensin-like family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.596.6GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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