Co-expression analysis

Gene ID PsAffx.C232000020_at
Gene name
Homology with ArabidopsisSimilar to At4g17695: KAN3 (KANADI 3) (HF=7e-2)
Module size 35 genes
NF 0.46
%ile 77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8392.50.86PsAffx.C232000020_atPsAffx.C232000020--7e-2At4g17695KAN3 (KANADI 3)O.I.H.G.S.X.
0.6886.40.89PsAffx.CL1633Contig1_atPsAffx.CL1633Contig1--2e+1At3g5634040S ribosomal protein S26 (RPS26C)O.I.H.G.S.X.
0.6886.40.89PsAffx.C77000031_s_atPsAffx.C77000031--1e-2At1g70280NHL repeat-containing proteinO.I.H.G.S.X.
0.6583.80.89PsAffx.C67000045_atPsAffx.C67000045--8e+0At4g19200proline-rich family proteinO.I.H.G.S.X.
0.6282.10.90PsAffx.C146000020_atPsAffx.C146000020--1e-2At4g39870-O.I.H.G.S.X.
0.5979.50.89PsAffx.psMY009iD11r_atPsAffx.psMY009iD11r--9e-1At1g10865-O.I.H.G.S.X.
0.5979.50.90PsAffx.C167000023_atPsAffx.C167000023--2e+0At2g36261unknown proteinO.I.H.G.S.X.
0.5979.50.89PsAffx.psMC003xO21f_atPsAffx.psMC003xO21f--4e+0At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.5678.20.90PsAffx.CL363Contig1_atPsAffx.CL363Contig1--9e+0At3g50685unknown proteinO.I.H.G.S.X.
0.5678.20.89PsAffx.psHB003xD11f_atPsAffx.psHB003xD11f--4e+0At3g62336unknown proteinO.I.H.G.S.X.
0.5678.20.90PsAffx.C79000033_s_atPsAffx.C79000033--4e+0At4g29610cytidine deaminase, putative / cytidine aminohydrolase, putativeO.I.H.G.S.X.
0.5576.30.90PsAffx.CL2251Contig1_atPsAffx.CL2251Contig1--4e+0At3g07425unknown proteinO.I.H.G.S.X.
0.5474.80.91PsAffx.C200000014_atPsAffx.C200000014--1e-1At3g14130(S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putativeO.I.H.G.S.X.
0.5273.10.90PsAffx.C71000078_atPsAffx.C71000078--2e+0At1g26340CB5-A (CYTOCHROME B5 ISOFORM A)O.I.H.G.S.X.
0.5273.10.90PsAffx.C148000016_atPsAffx.C148000016--6e-5At2g36250FTSZ2-1O.I.H.G.S.X.
0.5273.10.90PsAffx.C25000014_atPsAffx.C25000014--2e-8At2g33730DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.5172.30.89PsAffx.psZS006xA07f_atPsAffx.psZS006xA07f--4e+0At2g22055RALFL15 (RALF-LIKE 15)O.I.H.G.S.X.
0.5071.70.92PsAffx.C197000019_atPsAffx.C197000019--1e+0At4g35490MRPL11 (MITOCHONDRIAL RIBOSOMAL PROTEIN L11)O.I.H.G.S.X.
0.5071.70.89PsAffx.C95000059_atPsAffx.C95000059--2e+0At5g15640mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.4968.30.89PsAffx.C24000088_atPsAffx.C24000088--3e+0At5g51280DEAD-box protein abstrakt, putativeO.I.H.G.S.X.
0.4867.70.91PsAffx.C135000021_atPsAffx.C135000021--4e-2At5g42790PAF1O.I.H.G.S.X.
0.4867.70.91PsAffx.C18000094_s_atPsAffx.C18000094--3e+0At4g02715unknown proteinO.I.H.G.S.X.
0.4867.70.91PsAffx.C143000013_atPsAffx.C143000013--2e+0At5g49800-O.I.H.G.S.X.
0.4867.70.90PsAffx.C47000058_s_atPsAffx.C47000058--2e+0At1g55330AGP21O.I.H.G.S.X.
0.4867.70.90PsAffx.C215000004_atPsAffx.C215000004--8e-2At3g53470unknown proteinO.I.H.G.S.X.
0.4360.60.89PsAffx.C78000021_atPsAffx.C78000021--6e-2At1g70900unknown proteinO.I.H.G.S.X.
0.3853.30.90PsAffx.C67000061_s_atPsAffx.C67000061--8e-1At5g52200unknown proteinO.I.H.G.S.X.
0.3853.30.90PsAffx.C161000037_s_atPsAffx.C161000037--4e+0At5g42780AtHB27 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 27)O.I.H.G.S.X.
0.3751.70.90PsAffx.C5000113_atPsAffx.C5000113--2e-2At1g80410EMB2753 (EMBRYO DEFECTIVE 2753)O.I.H.G.S.X.
0.3650.80.89PsAffx.CL2431Contig1_atPsAffx.CL2431Contig1--7e-2At1g77200AP2 domain-containing transcription factor TINY, putativeO.I.H.G.S.X.
0.3650.80.89PsAffx.C52000040_atPsAffx.C52000040--9e-1At2g20470kinaseO.I.H.G.S.X.
0.3243.70.91PsAffx.C21000053_atPsAffx.C21000053--1e+0At5g57590BIO1 (biotin auxotroph 1)O.I.H.G.S.X.
0.2735.70.91PsAffx.C103000011_atPsAffx.C103000011--4e+0At5g63905unknown proteinO.I.H.G.S.X.
0.2228.10.89PsAffx.CL1471Contig1_atPsAffx.CL1471Contig1--3e-1At3g29780RALFL27 (ralf-like 27)O.I.H.G.S.X.
0.2025.10.89GmaAffx.35370.1.S1_s_atBE583805--1e+1At5g47455unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.099.0GSM17167528_W.I.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.698.9GSM17161113_W.E.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
7.498.9GSM29430354_3153.2I.R9I2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
6.898.7GSM1717034_W.E.I.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.698.7GSM17168029_Y.F.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.698.7GSM17166024_Y.I.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.598.7GSM17161915_W.F.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
6.398.6GSM17169331_Z.I.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.898.4GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.798.4GSM2940924_3111.2G.R9G1L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.798.4GSM17167728_Z.E.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.698.3GSM17160612_V.I.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.598.3GSM17166425_Y.E.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.598.3GSM29311328_C047.1O.R9O2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
5.498.2GSM17164621_V.E.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.198.1GSM1717259_Z.F.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
5.198.1GSM29301520_1089.1N.R055L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.998.0GSM1717126_Y.L.M.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.998.0GSM17163419_V.F.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.797.8GSM1717106_V.L.M.5, Experimental replicate VGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.797.8GSM1717198_W.L.M.5, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.597.7GSM1716852_Z.L.M.5, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.497.6GSM1717208_Y.E.I.5, Experimental replicate YGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.297.4GSM17159910_W.I.M.3, Experimental replicate WGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistanceLink to GEO
4.197.3GSM29415116_3139.2H.R9H3L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.197.3GSM29296644_C221.1M.R9M1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29322615_C065.1P.R9P2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
4.097.2GSM29321393_C039.1O.SLO1L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM2924059_C101.1F.R9F2L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.897.0GSM29426220_2405.2I.R084L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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