Co-expression analysis

Gene ID	PsAffx.C158000038_at
Gene name
Homology with Arabidopsis	Similar to At5g56520: unknown protein (HF=3e-2)
Module size	6 genes
NF	0.08
%ile	24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.65	PsAffx.C158000038_at	PsAffx.C158000038	-	-	3e-2	At5g56520	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	88.9	0.85	PsAffx.C99000057_at	PsAffx.C99000057	-	-	2e+0	At5g04490	VTE5 (vitamin E pathway gene5)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.83	PsAffx.C38000019_at	PsAffx.C38000019	-	-	2e-1	At2g02061	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.85	PsAffx.C15000001_s_at	PsAffx.C15000001	-	-	2e+0	At2g01670	atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17)	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.85	PsAffx.C8000052_at	PsAffx.C8000052	-	-	4e-1	At2g15280	reticulon family protein (RTNLB10)	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.86	PsAffx.psZS003xA01f_at	PsAffx.psZS003xA01f	-	-	5e+0	At5g22650	HD2B (HISTONE DEACETYLASE 2B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.4	99.4	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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