Co-expression analysis

Gene ID PsAffx.C158000038_at
Gene name
Homology with ArabidopsisSimilar to At5g56520: unknown protein (HF=3e-2)
Module size 6 genes
NF 0.08
%ile 24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.65PsAffx.C158000038_atPsAffx.C158000038--3e-2At5g56520unknown proteinO.I.H.G.S.X.
0.7388.90.85PsAffx.C99000057_atPsAffx.C99000057--2e+0At5g04490VTE5 (vitamin E pathway gene5)O.I.H.G.S.X.
0.6181.80.83PsAffx.C38000019_atPsAffx.C38000019--2e-1At2g02061unknown proteinO.I.H.G.S.X.
0.6080.70.85PsAffx.C15000001_s_atPsAffx.C15000001--2e+0At2g01670atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17)O.I.H.G.S.X.
0.024.50.85PsAffx.C8000052_atPsAffx.C8000052--4e-1At2g15280reticulon family protein (RTNLB10)O.I.H.G.S.X.
0.013.40.86PsAffx.psZS003xA01f_atPsAffx.psZS003xA01f--5e+0At5g22650HD2B (HISTONE DEACETYLASE 2B)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.499.4GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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