Co-expression analysis

Gene ID	PsAffx.C154000024_at
Gene name
Homology with Arabidopsis	Similar to At5g62160: AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR) (HF=2e-1)
Module size	6 genes
NF	0.92
%ile	99.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.87	PsAffx.C154000024_at	PsAffx.C154000024	-	-	2e-1	At5g62160	AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.84	PsAffx.C86000057_at	PsAffx.C86000057	-	-	2e+0	At1g06690	aldo/keto reductase family protein	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.87	HgAffx.24315.1.S1_at	CB374815	-	-	9e-1	At4g15930	microtubule motor	O.I.	H.G.	S.X.	Please select
0.91	98.6	0.89	PsAffx.C47000085_at	PsAffx.C47000085	-	-	2e+0	At1g04350	2-oxoglutarate-dependent dioxygenase, putative	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.87	PsAffx.C177000015_at	PsAffx.C177000015	-	-	2e-1	At4g25150	acid phosphatase, putative	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.87	HgAffx.5776.1.S1_at	CB826435	-	-	1e+0	At5g59030	COPT1 (copper transporter 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
49.4	99.9	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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