Co-expression analysis

Gene ID Os12g0626000
Gene name
Homology with ArabidopsisSimilar to At3g13570: SCL30a (HF=9e-3)
Module size 8 genes
NF 0.50
%ile 66.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5777.00.98Os12g0626000AK109499.1-Hypothetical protein9e-3At3g13570SCL30aO.I.H.G.S.X.
0.5068.00.99Os08g0112400AK071947.1-TPR-like domain containing protein9e-2At1g71490pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.5068.00.99Os06g06849009634.m04588--3e-6At2g35640hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5068.00.99Os01g0561500BI306374-Conserved hypothetical protein4e+0At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)O.I.H.G.S.X.
0.4762.30.99Os07g0555300AK071161.1-Hypothetical protein9e-2At3g22840ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN)O.I.H.G.S.X.
0.4458.10.99Os08g01536009636.m00506-Protein prenyltransferase domain containingprotein2e-1At5g40405-O.I.H.G.S.X.
0.4051.10.99Os03g0857200CA767322-Conserved hypothetical protein2e+0At5g55550RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3846.90.99Os01g0773500AK062417.1-Conserved hypothetical protein4e-1At1g20490AMP-dependent synthetase and ligase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
50.399.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.298.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.198.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.598.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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