Co-expression analysis

Gene ID Os12g0611100
Gene name
Homology with ArabidopsisSimilar to At1g16670: protein kinase family protein (HF=2e-5)
Module size 17 genes
NF 0.18
%ile 15.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.40.82Os12g0611100AK066826.1-SRKb2e-5At1g16670protein kinase family proteinO.I.H.G.S.X.
0.3948.30.90Os01g0931100AK068780.1-Conserved hypothetical protein3e-4At5g27730unknown proteinO.I.H.G.S.X.
0.2931.10.85Os04g0194500AK121164.1-ABC transporter-like protein3e-11At5g60740ATPase, coupled to transmembrane movement of substancesO.I.H.G.S.X.
0.2321.20.86Os06g0329900AK068748.1-SAM dependent carboxyl methyltransferase familyprotein3e+0At2g17055disease resistance protein-relatedO.I.H.G.S.X.
0.2321.20.89Os05g0443400AK072943.1-Glycoside hydrolase, family 17 protein3e-4At5g42100ATBG_PAPO.I.H.G.S.X.
0.2117.90.90Os02g0827900AK099911.1-Signal peptidase 18 subunit (Fragment)5e-8At1g52600signal peptidase, putativeO.I.H.G.S.X.
0.1915.10.91Os01g0960400AK111991.1-Protein kinase domain containing protein5e-9At1g06840leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.1712.60.88Os02g0118200AK111716.1-Protein kinase8e-4At4g35600CONNEXIN 32O.I.H.G.S.X.
0.1611.30.89Os06g0554700AK064200.1-Kinesin heavy chain (Fragment)9e-10At1g63640kinesin motor protein-relatedO.I.H.G.S.X.
0.1611.30.91Os11g0147000AK067232.1-Long chain acyl-CoA synthetase 6 (EC 6.2.1.3)2e-33At3g05970LACS6 (long-chain acyl-CoA synthetase 6)O.I.H.G.S.X.
0.149.30.89Os06g0623600AK073641.1-Cinnamoyl-CoA reductase (EC 1.2.1.44)3e+0At5g01300phosphatidylethanolamine-binding family proteinO.I.H.G.S.X.
0.138.20.90Os02g0763900AK100977.1-Galactoside 2-alpha-L-fucosyltransferase (EC2.4.1.69) (Xyloglucan alpha-(1,2)-fucosyltransferase)(AtFUT1)9e-1At5g65420CYCD4O.I.H.G.S.X.
0.116.50.90Os10g0100500AK102556.1-Protein kinase domain containing protein4e-4At2g07020protein kinase family proteinO.I.H.G.S.X.
0.105.70.86Os02g02411009630.m01346-Protein kinase domain containing protein3e-1At4g29460phospholipase A2 gamma, secretory low molecular weightO.I.H.G.S.X.
0.105.70.86Os09g0572900AK069270.1-Dynamin-like protein 4 (ADL4) (Dynamin-likeprotein E)1e-37At3g60190ADL1E (ARABIDOPSIS DYNAMIN-LIKE 1E)O.I.H.G.S.X.
0.084.20.90Os06g0716000AK067426.1-Protein of unknown function DUF668 family protein4e-3At1g34320unknown proteinO.I.H.G.S.X.
0.052.50.86Os05g0595300CR286124-CCT domain containing protein4e+0At2g47270transcription factor/ transcription regulatorO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
37.299.8GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
13.498.5GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0611GO:0042546The process by which a cell wall is synthesized, aggregates, and bonds together. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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