Co-expression analysis

Gene ID Os12g0597700
Gene name
Homology with ArabidopsisSimilar to At5g28650: WRKY74 (HF=4e-28)
Module size 17 genes
NF 0.26
%ile 25.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.40.95Os12g0597700AK070648.1-Probable WRKY transcription factor 15 (WRKYDNA-binding protein 15)4e-28At5g28650WRKY74O.I.H.G.S.X.
0.3338.80.96Os12g0506400AK060944.1-Cornichon family protein2e-4At1g62880cornichon family proteinO.I.H.G.S.X.
0.3032.70.96Os05g0301600AK073928.1-Protein phosphatase inhibitor 2 (IPP-2) familyprotein4e-17At5g52200unknown proteinO.I.H.G.S.X.
0.3032.70.96Os04g0659500AK072534.1-Protein phosphatase 2C-like domain containingprotein8e-19At4g31750WIN2 (HOPW1-1-INTERACTING 2)O.I.H.G.S.X.
0.2931.10.97Os12g0407500AK100320.1-Tyrosine specific protein phosphatase and dualspecificity protein phosphatase family protein3e-84At3g19420ATPEN2 (ARABIDOPSIS THALIANA PTEN 2)O.I.H.G.S.X.
0.2625.60.96Os01g0813900AK101729.1-ZIGA1 protein (Fragment)7e-6At1g08680ZIGA4 (ARF GAP-like zinc finger-containing protein ZiGA4)O.I.H.G.S.X.
0.2524.10.97Os06g0247800AK102187.1-Dynamin-like protein (Fragment)2e-30At1g10290ADL6 (DYNAMIN-LIKE PROTEIN 6)O.I.H.G.S.X.
0.2524.10.97Os03g0707300AK066944.1-Conserved hypothetical protein5e+0At5g23510unknown proteinO.I.H.G.S.X.
0.2524.10.97Os07g0239400AK068609.1-Ethylene-responsive small GTP-binding protein4e-76At5g59840Ras-related GTP-binding family proteinO.I.H.G.S.X.
0.2321.20.96Os04g0665500AK066509.1-SWIB/MDM2 domain containing protein4e-1At4g22360SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2321.20.96Os07g0511900AK060218.1-Conserved hypothetical protein2e-1At5g20620UBQ4O.I.H.G.S.X.
0.2117.90.96Os01g0550100AK066233.1-Ubiquitin-specific protease 65e-21At1g51710UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6)O.I.H.G.S.X.
0.2016.50.96Os07g0252000AK109741.1-WD40-like domain containing protein1e-2At2g26060emb1345 (embryo defective 1345)O.I.H.G.S.X.
0.1915.10.97Os03g0823700AK061336.1-Ras-related protein Rab11C1e-42At1g07410ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B)O.I.H.G.S.X.
0.1712.60.96Os05g0418000AK066648.1-GDP dissociation inhibitor protein OsGDI18e-32At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)O.I.H.G.S.X.
0.1510.30.96Os03g0803000AK102944.1-Vesicle-associated membrane protein 725(AtVAMP725)2e-34At1g04760ATVAMP726O.I.H.G.S.X.
0.116.50.97Os03g0804300AK067295.1-Huntingtin-interacting protein 146e-14At3g60800zinc finger (DHHC type) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.599.0GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.898.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.898.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.498.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0801GO:0043087Any process that modulates the rate of GTP hydrolysis by a GTPase.Link to AmiGO
0.0763GO:0015031The directed movement of proteins into, out of, within or between cells.Link to AmiGO
0.0612GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage