Co-expression analysis

Gene ID Os12g0578400
Gene name
Homology with ArabidopsisSimilar to At5g61250: AtGUS1 (Arabidopsis thaliana glucuronidase 1) (HF=3e-4)
Module size 6 genes
NF 0.06
%ile 3.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4660.90.85Os12g0578400AK060767.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein3e-4At5g61250AtGUS1 (Arabidopsis thaliana glucuronidase 1)O.I.H.G.S.X.
0.6079.70.86Os04g0531400AK105289.1-Receptor like protein kinase2e-2At4g02420lectin protein kinase, putativeO.I.H.G.S.X.
0.2219.40.86Os03g0700700AK072689.1-Lipoxygenase (EC 1.13.11.12)3e-5At3g22400LOX5O.I.H.G.S.X.
0.073.70.85Os04g0506100AK059053.1-Receptor-like protein kinase5e-21At5g63930leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.021.00.85Os05g04141009633.m03166-Transcription factors TFIIS, elongin A, CRSP70,conserved domain containing protein2e-2At5g11930glutaredoxin family proteinO.I.H.G.S.X.
0.021.00.86Os07g0551400AK109507.1-Universal stress protein (Usp) family protein1e-11At1g11360universal stress protein (USP) family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.699.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.598.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.298.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0541GO:0006950A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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