| Gene ID | Os12g0541400 |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g01300: phosphatidylethanolamine-binding family protein (HF=3e+0) |
| Module size | 6 genes |
| NF | 0.64 |
| %ile | 87.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.61 | 81.2 | 0.96 | Os12g0541400 | BQ907958 | - | Hypothetical protein | 3e+0 | At5g01300 | phosphatidylethanolamine-binding family protein | O.I. | H.G. | S.X. | |
| 0.77 | 93.1 | 0.97 | Os02g0179300 | AK069065.1 | - | RAD23 protein, isoform II | 9e-10 | At1g16190 | DNA repair protein RAD23, putative | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.97 | Os07g0688800 | AK068462.1 | - | Aldehyde dehydrogenase domain containing protein | 4e-22 | At3g66658 | ALDH22a1 (Aldehyde Dehydrogenase 22a1) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.97 | Os11g0568500 | AK059656.1 | - | Prefoldin beta-like family protein | 7e-3 | At3g22480 | prefoldin-related KE2 family protein | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.97 | Os03g0288600 | AK101532.1 | - | Muscle derived-like protein | 6e-11 | At5g50840 | - | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | 0.97 | Os01g0710000 | AK111794.1 | - | - | 8e-63 | At2g19520 | FVE | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 19.7 | 99.1 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 13.0 | 98.4 | GSM154937 | Root_tZ-treatment_30min_replicate 2 | GSE6719 | Cytokinin responsive genes in rice | |
| 12.5 | 98.3 | GSM154833 | Root_tZ-treatment_30min_replicate 1 | GSE6719 | Cytokinin responsive genes in rice | |
| 12.4 | 98.3 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 12.0 | 98.3 | GSM154938 | Root_tZ-treatment_30min_replicate 3 | GSE6719 | Cytokinin responsive genes in rice | |
| 9.5 | 97.9 | GSM154944 | Root_tZ-treatment_120min_replicate 3 | GSE6719 | Cytokinin responsive genes in rice | |
| 8.8 | 97.8 | GSM154942 | Root_tZ-treatment_120min_replicate 1 | GSE6719 | Cytokinin responsive genes in rice | |
| 8.7 | 97.8 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.4 | 97.7 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.3 | 97.7 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.118 | 1 | GO:0006289 | A DNA repair process in which a small region of the strand surrounding the damage is removed from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase. Nucleotide excision repair recognizes a wide range of substrates, including damage caused by UV irradiation (pyrimidine dimers and 6-4 photoproducts) and chemicals (intrastrand cross-links and bulky adducts). |  |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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