Co-expression analysis

Gene ID Os12g0527700
Gene name
Homology with ArabidopsisSimilar to At1g78850: curculin-like (mannose-binding) lectin family protein (HF=2e-2)
Module size 26 genes
NF 0.45
%ile 57.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8194.80.94Os12g0527700AK065898.1-Protein kinase domain containing protein2e-2At1g78850curculin-like (mannose-binding) lectin family proteinO.I.H.G.S.X.
0.6887.50.97Os03g0749800AK111770.1-Protein kinase3e-22At5g20930TSL (TOUSLED)O.I.H.G.S.X.
0.6683.90.97Os07g0606500AK070274.1-ATP-dependent RNA helicase, eIF-4A family8e-6At5g08110DEAD/DEAH box helicase, putativeO.I.H.G.S.X.
0.6583.80.97Os10g0575800AK120242.1-ARM repeat fold domain containing protein6e-1At4g36791unknown proteinO.I.H.G.S.X.
0.6181.20.96Os09g0417500AK063513.1-TPR-like domain containing protein3e-1At1g77145unknown proteinO.I.H.G.S.X.
0.6079.70.96Os07g0229100AK070112.1-Cyclin-like F-box domain containing protein3e-1At3g45500-O.I.H.G.S.X.
0.5877.00.96Os07g05131009635.m03236-3'-5' exonuclease domain containing protein8e-21At2g324153'-5' exonuclease/ nucleic acid bindingO.I.H.G.S.X.
0.5777.00.97Os03g0396900AK071398.1-PIMT6e-6At1g45231-O.I.H.G.S.X.
0.5573.70.96Os05g0463400AK100354.1-Hypothetical protein5e-3At1g13910leucine-rich repeat family proteinO.I.H.G.S.X.
0.5471.90.96Os10g0551100AK106659.1-Conserved hypothetical protein2e+0At4g31020unknown proteinO.I.H.G.S.X.
0.5068.00.95Os05g0387800AK101626.1-GCN5-related N-acetyltransferase domain containingprotein9e-1At5g42905nucleic acid binding / ribonuclease HO.I.H.G.S.X.
0.4964.40.96Os06g0235300AK066631.1-Hypothetical protein4e-1At3g02320RNA binding / tRNA (guanine-N2-)-methyltransferaseO.I.H.G.S.X.
0.4762.30.96Os11g0160700AK073141.1-FYVE/PHD zinc finger domain containing protein4e-1At3g10790F-box family proteinO.I.H.G.S.X.
0.4558.80.97Os02g0591600AK060151.1-WD40-like domain containing protein1e-1At2g3719060S ribosomal protein L12 (RPL12A)O.I.H.G.S.X.
0.4458.10.96Os05g0481800AK110987.1-Hypothetical protein2e+0At4g03510RMA1O.I.H.G.S.X.
0.4355.40.96Os05g0596600AK107823.1-SMC protein, N-terminal domain containing protein6e-28At5g15920structural maintenance of chromosomes (SMC) family protein (MSS2)O.I.H.G.S.X.
0.4051.10.96Os11g0136800AK063731.1-Dual specificity protein phosphatase 19 (EC3.1.3.48) (EC 3.1.3.16) (Protein phosphatase SKRP1).Splice isoform 23e+0At5g15560unknown proteinO.I.H.G.S.X.
0.3948.30.97Os03g0725300AK063969.1-Metallophosphoesterase domain containing protein2e-7At4g31770calcineurin-like phosphoesterase family proteinO.I.H.G.S.X.
0.3948.30.96Os05g0150600AY180331.1-ATP-dependent DNA helicase RecQ family protein6e-6At5g27680RECQSIM (Arabidopsis RecQ helicase sim)O.I.H.G.S.X.
0.3948.30.96Os05g0455900AK102806.1-Protein prenyltransferase domain containingprotein6e-4At4g04370pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3440.00.97Os03g08160009631.m05921-Conserved hypothetical protein9e-6At5g05230ubiquitin-protein ligaseO.I.H.G.S.X.
0.3134.50.97Os11g0661000AK066047.1-TPR-like domain containing protein9e-3At4g14050pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3032.70.95Os03g0337200AK065446.1-Hypothetical protein1e-1At1g28540unknown proteinO.I.H.G.S.X.
0.3032.70.96Os07g0179000AK119505.1-TPR-like domain containing protein5e-1At1g066202-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.2625.60.96Os04g0670400AK064003.1-Ovarian tumour, otubain domain containing protein4e-3At5g67170SEC-C motif-containing protein / OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.2321.20.96Os12g0510000AK101963.1-Hypothetical protein3e+0At4g04110Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.099.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
23.999.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.599.1GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
11.398.2GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.698.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0481GO:0006259The chemical reactions and pathways involving DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.Link to AmiGO
0.0361GO:0015986The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.Link to AmiGO
0.0331GO:0051276A process that is carried out at the cellular level that results in the assembly, arrangement of constituent parts, or disassembly of chromosomes, structures composed of a very long molecule of DNA and associated proteins that carries hereditary information.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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