Co-expression analysis

Gene ID Os12g0522740
Gene name
Homology with ArabidopsisSimilar to At5g23680: sterile alpha motif (SAM) domain-containing protein (HF=2e-1)
Module size 6 genes
NF 0.52
%ile 69.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os12g05227409640.m03268--2e-1At5g23680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.5068.00.98Os07g05423009635.m03536--6e-1At5g10820integral membrane transporter family proteinO.I.H.G.S.X.
0.4660.90.98Os12g01723009640.m00672--6e+0At5g25240-O.I.H.G.S.X.
0.4660.90.98Os09g03777009637.m01809--1e-1At3g17940aldose 1-epimerase family proteinO.I.H.G.S.X.
0.4051.10.98Os04g01314009632.m00329--8e-1At5g64810WRKY51O.I.H.G.S.X.
0.3032.70.98Os06g05369009634.m03267--1e+0At1g12850phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
36.899.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
33.199.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
32.999.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.399.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
22.999.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
22.399.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
21.999.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
21.599.2GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
20.399.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
20.099.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
20.099.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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