Co-expression analysis

Gene ID Os12g0485300
Gene name
Homology with ArabidopsisSimilar to At4g13850: GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) (HF=3e-1)
Module size 6 genes
NF 0.03
%ile 2.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.70.80Os12g0485300AK064188.1-Hypothetical protein3e-1At4g13850GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.2524.10.91Os07g0287100AK066004.1-TPR-like domain containing protein8e-5At1g78915bindingO.I.H.G.S.X.
0.105.70.91Os09g0515400AK103734.1-Conserved hypothetical protein2e+0At1g80700unknown proteinO.I.H.G.S.X.
0.042.00.91Os06g0103600AK072800.1-Aminoacyl-t-RNA synthetase precursor8e-46At3g48110EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1)O.I.H.G.S.X.
0.042.00.84Os05g0193800AK067940.1-Conserved hypothetical protein2e+0At1g70120unknown proteinO.I.H.G.S.X.
0.010.50.86Os05g0544900AK109267.1-Hypothetical protein5e-1At4g23770unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
54.999.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.699.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.998.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.098.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2501GO:0006420The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.Link to AmiGO
0.2501GO:0006426The process of coupling glycine to glycyl-tRNA, catalyzed by glycyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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