Co-expression analysis

Gene ID Os12g0473400
Gene name
Homology with ArabidopsisSimilar to At5g23090: NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13) (HF=2e+0)
Module size 6 genes
NF 0.68
%ile 91.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.98Os12g04734009640.m02775--2e+0At5g23090NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)O.I.H.G.S.X.
0.9198.90.98Os07g0416700NM_188187.1--5e+0At5g18180Gar1 RNA-binding region family proteinO.I.H.G.S.X.
0.6181.20.98Os10g04241009638.m02453-BTB/POZ domain containing protein7e+0At3g24506unknown proteinO.I.H.G.S.X.
0.5676.30.98Os05g05319009633.m04267--6e+0At3g50510LBD28 (LOB DOMAIN-CONTAINING PROTEIN 28)O.I.H.G.S.X.
0.5371.30.98Os04g04720009632.m03753--5e+1At5g45490disease resistance protein-relatedO.I.H.G.S.X.
0.5068.00.98Os01g0371900NM_193844.1--1e+1At3g48570protein transport protein SEC61 gamma subunit, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
86.7100.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
39.899.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
29.999.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.399.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
20.199.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
19.799.1GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
19.199.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.298.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.098.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.198.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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